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Information for unigene UN15788
| FASTA Sequence |
| Unigene ID: UN15788 | Length: 654 |
SSR | | TTTTTTGGTCACTATCAGATTCTCATCAGTTGCAATGTCCAAGAACAACGGAGCTCGTAGCTGTTTAGGCTCGATGGACGACATCC
GCGTCGTCTTCCAGCGATTCGACAAAAACGGAGACGGAAAAATCTCCGTCGACGAGCTCAAGGAGGTGATCCGCGCGCTGAGCCCC
ACCTCGTCGCCGGAGGAGACAGTGAAGATGATGAAACAGTTCGATCTGGACGGAAACGGATTCATCGACATGGACGAGTTCGTCTC
TCTTTTCCAGATCGGAATGAGTCAAGGAGGAGGAGGAGGGAACAGCAAGAACGATCTGAAGGAAGCGTTCGAGCTGTACGATCTGG
ACGGTAACGGGCGGATCTCGGCGAAGGAGCTTCACTCGGTGATGAAGAGTCTGGGGGAGAAGTGTTCTGTTCAGGACTGCAGGAAG
ATGATTAGCAAAGTTGATACGGATGGTGATGGTTGCGTTAACTTCGAGGAGTTTAAGCTGATGATGAAAAACGGCGGAGCTTGATG
ATCGATCGTATTAGGGATTGTTTGTATAGAGGAAAGCTAGAAAAGTTTGGTTTTATGAGTTTTTTTTTACTTTATGTGCTACAACT
TCCCTTATTCACTATTGAGATGTTCTGATGGGCCTGACTTGCGAAAAAAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002870563 hypothetical protein ARALYDRAFT_493755 [Arabidopsis lyrata subsp. lyrata] | 703 | 3e-072 |
| NP_198593 calcium-binding protein CML24 [Arabidopsis thaliana] | 696 | 2e-071 |
| XP_002888497 hypothetical protein ARALYDRAFT_475742 [Arabidopsis lyrata subsp. lyrata] | 583 | 3e-058 |
| AAM67124 calmodulin-related protein [Arabidopsis thaliana] | 576 | 2e-057 |
| NP_564874 putative calcium-binding protein CML23 [Arabidopsis thaliana] | 573 | 4e-057 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P25070 Calcium-binding protein CML24 | 696 | 1e-072 |
| Q9C8Y1 Probable calcium-binding protein CML23 | 573 | 2e-058 |
| Q0DJV6 Probable calcium-binding protein CML18 | 399 | 3e-038 |
| Q9FYK2 Probable calcium-binding protein CML25 | 359 | 1e-033 |
| Q9M7R0 Calcium-binding allergen Ole e 8 | 345 | 5e-032 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PFE1 Predicted protein | 436 | 2e-041 |
| B9H383 Predicted protein | 435 | 3e-041 |
| A5BZ57 Putative uncharacterized protein | 421 | 1e-039 |
| B9SJ25 Polcalcin Jun o, putative | 402 | 2e-037 |
| B9T2J5 Calcium-binding allergen Ole e, putative | 402 | 2e-037 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G37770.1 TCH2 (TOUCH 2); calcium ion binding | 696 | 1e-073 |
| AT1G66400.1 calmodulin-related protein, putative | 574 | 1e-059 |
| AT1G24620.1 polcalcin, putative / calcium-binding pollen allergen, putative | 359 | 1e-034 |
| AT5G17470.1 calmodulin-related protein, putative | 345 | 5e-033 |
| AT2G36180.1 calmodulin-related protein, putative | 331 | 2e-031 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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