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Information for unigene UN15802
FASTA Sequence |
Unigene ID: UN15802 | Length: 808 |
SSR | | TAATGACAAAAGAATCAATTAACAAATTTGTAACACAAACCCTTCCCATCGTCTCATACTAAAAAAAAACAAAAATCCCACTAACC
ATAAGCTGTTTCTTCTTAAAAGAGTGCAATAGATCCGAAACTAAAAAGACAACCTAAGTAGGACAGATACTTGAGAAAATTACCCT
CACGGTAAAAAAGGTATCATTCTTCTTTTCTTCCCCAACCCAACATTTTTTACCGTCTAATATACCGTTGCTTCTTCCATGAACTT
CGTTGCAGTGACTGGTCAGGCTTTGGTCTTGGACACAGCATAACTCTGTTACTACTACACCTTTTTTTCTGGTTACATAATCACTT
TGGTAGTTAAAAGAAAGCGAGAGAGAAAGAGAGAGCGTCTGAAAAAAATGAGAAAAGGAAAGTTAAATTTGGAGCAAGCTGGTTCC
ATGTTCTTTTTTCTTCTTCCATCTCTCTCTCTCCAGTTCATGCATAATACATGTACAAGCTGTTTGCTGCTGCACAAGCAATTGAG
TTCTCTGTTGGGTGCCAAGCCATATGCAGCAACTTATTTGTGAAGTCATACCCGTTCCCGTTCGCCTCTGCTCCTGGACTCTCTGA
TCCTCGTCTAACCATACGCGTCATGCTGCTAATAGCTCTGGAAGGTCTTGCAGGTGTCTGGATTTGCCTTCTCATAGGGTTTTTGC
TAGCTTCCAAAGTTGCCGCTTCAGTACTTCCTTAGAGGCTCCAAATACACGGAATAGATTGCTGTAAGAGCCTGTTGCTACCCTCA
ATCCATCACCACTCAGACACACTCGACTTATCAA
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GenBank top hits (Blast detail) | Score | e value |
NP_564033 Protein phosphatase 2A, regulatory subunit PR55 [Arabidopsis thaliana] | 405 | 2e-037 |
NP_849681 Protein phosphatase 2A, regulatory subunit PR55 [Arabidopsis thaliana] | 405 | 2e-037 |
XP_002892965 ATB beta [Arabidopsis lyrata subsp. lyrata] | 405 | 2e-037 |
XP_002329034 predicted protein [Populus trichocarpa] | 379 | 2e-034 |
XP_002534125 protein phosphatase pp2a regulatory subunit B, putative [Ricinus communis] | 377 | 3e-034 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q39247 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform | 405 | 8e-039 |
A2X2K3 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform | 344 | 1e-031 |
Q0E2P1 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform | 344 | 1e-031 |
Q38821 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform | 338 | 5e-031 |
Q5Z8Z7 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform | 336 | 8e-031 |
TrEMBL top hits (Blast detail) | Score | e value |
Q0WW19 Type 2A protein serine/threonine phosphatase 55kDa B regulatory subunit | 405 | 1e-037 |
B9N1B7 Predicted protein | 379 | 1e-034 |
B9T7A6 Protein phosphatase pp2a regulatory subunit B, putative | 377 | 2e-034 |
Q9FVD4 Ser/Thr specific protein phosphatase 2A B regulatory subunit beta isoform | 354 | 1e-031 |
B7ERB7 cDNA clone:J033025A11, full insert sequence | 344 | 2e-030 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT1G17720.1 ATB BETA; nucleotide binding / protein phosphatase type 2A regulator | 406 | 6e-040 |
AT1G17720.2 ATB BETA; nucleotide binding / protein phosphatase type 2A regulator | 406 | 6e-040 |
AT1G51690.1 ATB ALPHA; nucleotide binding / protein phosphatase type 2A regulator | 339 | 3e-032 |
AT1G51690.2 ATB ALPHA; nucleotide binding / protein phosphatase type 2A regulator | 339 | 3e-032 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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