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Information for unigene UN15811
| FASTA Sequence |
| Unigene ID: UN15811 | Length: 1172 |
SSR | | GGACACAAGCGGAAAAGAAAAATACTCTTTCGTGTCTAGCTAGCCATGGCCTCCGTCTGTAACTGTTTCCTCCAAGCTCCACCTCT
CTCTCGCTTTTTATCACCGGTTCTCTCACGCCGCGCTACGAATCTCTTCGCCGGCTATGGACGGCTCAAATCCACCGTCATGTTCT
CCTCCTCCTCCTCCGCCGCGAACCGAACCGGACCGTTGACATCTCCAGTCAGAGCTGAAGTGAAGCGCGTCTCGCGGAAGGACGAT
CAAGTAGCTTCTGCTTCTGATCTTCAATTCGAGACGCCGTTGAAGATCGTTGAGTATCCGGATCCTATCTTACGCGCTAAGTGCAA
GAGGATTGGTGTTTTCGACGAGAATTTGAAGAACTTGGCCGATGCTATGTTCGATGTTATGTACAAAACGGATGGCATCGGGCTGT
CAGCACCACAAGTGGGGCTCAATGTTCAGCTCATGGTGTTTAATCCAGCTGGGGAGTCTGGTGAAGGAGAAGAGATTGTTCTTGTG
AATCCGAAAATCAATAAATATTCTGATAAATTAGTACCGTTTAACGAAGGATGCTTATCCTTCCCTGGGATCTATGCTGATGTTGT
TCGACCACAATCTGTCAAGATTGACGCAAGGGACATTACTGGTGCAAGATTTTCAATCAGTCTATCACGTTTACCTGCACGAATCT
TCCAGCATGAATACGACCACCTTGAGGGAGTTCTCTTCTTCGACAGAATGACGGATGACGTTCTTGACACCATTCGTGAAGAGCTA
GAGGCCTTGGAAAAGAAGTACGAAGAAAAAACTGGATTGCCAAGCCCTGAAAAAGTACAAGCACGACAAAAAAAGAAAGCAGGAGT
TGGTTTTGGCAAACGTCGATGAGACATTCTCGCTCAATTCTCATTTCATCTTCGAATAGGATATGGGATTTAACAATGGTATGGGA
ATCAGACGATGACAAGACACACGTTTGCATTTCTCAATCCAGAGGAGCACATCACATTGTGTGATGCAAATCTCCCAAACTGGATG
TACGGTTGTAACAGATATCATTTATTTCAGAATCTTTTTTGCCAGAGTAATATATTATTCAAGATTGTCTGTTTGCGCTGTTGTAT
AATGTTAGCCTTTTAGCTTGAGCTTGTGAACTGCGTATAAAATGTTCTTTGCCG
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_196970 peptide deformylase 1B [Arabidopsis thaliana] | 1227 | 2e-132 |
| XP_002873683 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1224 | 4e-132 |
| AAM62644 Formylmethionine deformylase [Arabidopsis thaliana] | 1222 | 6e-132 |
| AAG33980 peptide deformylase [Arabidopsis thaliana] | 1221 | 8e-132 |
| 3CPM Chain A, Plant Peptide Deformylase Pdf1b Crystal Structure | 916 | 2e-096 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FUZ2 Peptide deformylase 1B, chloroplastic | 1227 | 7e-134 |
| Q9FV54 Peptide deformylase 1B, chloroplastic | 846 | 1e-089 |
| Q5VNN5 Peptide deformylase 1B, chloroplastic | 736 | 6e-077 |
| B1XJP0 Peptide deformylase | 356 | 7e-033 |
| Q7V3K7 Peptide deformylase | 342 | 3e-031 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S632 Polypeptide deformylase, putative | 901 | 7e-095 |
| B9GI48 Peptide deformylase (Fragment) | 855 | 2e-089 |
| C5XEI7 Putative uncharacterized protein Sb03g029040 | 731 | 4e-075 |
| B8ACB8 Putative uncharacterized protein | 709 | 1e-072 |
| B9EY90 Putative uncharacterized protein | 704 | 5e-072 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G14660.1 PDF1B (PEPTIDE DEFORMYLASE 1B); iron ion binding / peptide deformylase | 1232 | 2e-135 |
| AT5G14660.2 PDF1B (PEPTIDE DEFORMYLASE 1B); iron ion binding / peptide deformylase | 1232 | 2e-135 |
| AT1G15390.1 PDF1A (PEPTIDE DEFORMYLASE 1A); peptide deformylase | 155 | 1e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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