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Information for unigene UN15819
| FASTA Sequence |
| Unigene ID: UN15819 | Length: 1450 |
SSR | | GATTAAACACCTTAAATTGAATTTGGAGCTATACGCTTAAAAGATTTAAGACAAATCAACCAAGAAATAATGTTCAGTTGCAATAG
AAATGGCACAGTAGTATCATCAGAGATTCATCTACTTATGGTTGCTGCTGCTGCTGCTGCTTGAACTCTTCTTTTTCAGTAAGTTT
CCGAACTTCCGGAGCAAAGGCTTCTTCTTTTTCTGCTGTTGTTCCTTTGGGAGTAGGCTTCCAGCATCTTCAGCGTGGTCTGCAGA
AAACAAGCCATTGCTTAACTGATCAAAGTTTTCACTACCTTCTGCTTTCGATTCATCTTCCTCTTCAGCAAACTCGTGCTCTGACT
CTCTCCCTGAAAAAGCTTCTCTCTTCTCTATATGGTAGCCTTCCCACGTCTTGAACCCCACTTCCATGGAGTCTTTATCTTTGTCT
CCTTTTCCTACTCCTTCTACGTTGTGAGCTGACCAATGCATAGGTGAGTCATCTTTCAAATGTTGTTGACCAACGGCTTCCACTGG
ACTTTCTTGTACCTTTTGTTCTCCGGTTATGTGGTGAGAAGGTTCGGTTCCAGTAGTCTCTTCTTCTGTGCACTTGGAACCATTTT
CCTCTGAAGATTCTACAGCTTTGGAGATTAAGTGATGGCCATTTTCATCTGGTTTCTCTTTTCTGGAAGAAACTTCTTCTAGCAGC
CTTGTCAACTCTTCAATCTTCTTAAGCGCGGAAGCCTCTCTGGACTTGAGCTCAACGCTATCATGAACTACGGCCTGCAACTCGGT
TTCTTTCTCAAGTAGACTCTCTTTCATCTTTGACAACTCTTCTATCTTCTTTGCCAGAGAAGACACCTCAATTTCCCTGAGCTTTT
TGTTTTCTTCAGCAGCGTTCTTTAGCTCGTAGTCTTTCTCCAACAAGCTTTCTTCAAGTTTCATGCTTTCAGCTTTACCTTCTTCA
ACTCTTTCCTGCAGATCCTTAAGCTCCCTCTCAAGCTCCTTCAGATTCTTTTTGGTATTGGCTTCTTCTTCTTTTGCTTCTTGCGC
CTCAATTTCCTTAAGGTTAAGCAAGTTCTCCACCTTGCTAAGTTCTCCCTCCACAGAGATCTTTTCATCTTCTGATTTCTTCACAC
AAGCCATCAAATGAAGTTCTCTTTGTTCCCACTCAGTCTTGGAATTGACAATCTCATTCTGAGTGTTTTCCAAACTTCTTTTCAAG
CTATCAATTTCCTTTCTTGCATCTTCAATAACCTTTTCATACTTCTCATTTGTCTCTTTAGCAGCCAGCTTCAAACTTTCAATCTG
GTTTCCGCAATCTTCAACCTCTGCTTGACATGTCAAGAGCTTCTCCTTAGCTTCCTTTGCTTCCACAGATACTTCCTGCAGATCCA
AAGTTAAGCTCTCCATAGCTTTCTTGCTTTTCTCTTCTTCCTTCTTACAGTTCTCCAACTCTTTCTCTAGTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_680744 uncharacterized protein [Arabidopsis thaliana] | 877 | 9e-092 |
| AAD38273 Hypothetical protein [Arabidopsis thaliana] | 727 | 2e-074 |
| NP_176681 uncharacterized protein [Arabidopsis thaliana] | 727 | 2e-074 |
| XP_002520069 ATP binding protein, putative [Ricinus communis] | 599 | 1e-059 |
| XP_002270776 PREDICTED: hypothetical protein [Vitis vinifera] | 561 | 4e-055 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P24733 Myosin heavy chain, striated muscle | 201 | 9e-015 |
| P25386 Intracellular protein transport protein USO1 | 193 | 7e-014 |
| Q75JC9 Uncharacterized protein DDB_G0271670 | 174 | 1e-011 |
| Q59037 Chromosome partition protein smc homolog | 167 | 8e-011 |
| P32380 Protein NUF1 | 166 | 1e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3E9V7 Putative uncharacterized protein At4g27595.1 | 877 | 6e-092 |
| Q9XIP6 F13O11.30 protein | 727 | 1e-074 |
| B9S250 ATP binding protein, putative | 599 | 1e-059 |
| B9IPH4 Predicted protein | 543 | 3e-053 |
| B9I744 Predicted protein (Fragment) | 541 | 5e-053 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G27595.1 unknown protein | 877 | 3e-094 |
| AT1G65010.1 unknown protein | 727 | 8e-077 |
| AT5G16730.1 LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Spectrin/alpha-actinin (InterPro:IPR018159); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02930.1); Has 241703 Blast hits to 112530 proteins in 2711 species: Archae - 2642; Bacteria - 41887; Metazoa - 104467; Fungi - 18239; Plants - 8786; Viruses - 1373; Other Eukaryotes - 64309 (source: NCBI BLink). | 503 | 7e-051 |
| AT3G02930.1 unknown protein | 424 | 1e-041 |
| AT4G40020.1 unknown protein | 321 | 9e-030 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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