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Information for unigene UN15829

FASTA Sequence
Unigene ID: UN15829Length: 1557 SSR 
GAAACAAAGTTTAGTGTAGTCGTAAACAAAATTTGTTGTTCTTACAAAACCAGTAACATACGAGACTAATCTTGACATAACCCAGA
AACAGGGGATTTAGACAGACATGATACTAAGTACCTAGAAACGACAGACGCTAACAAGAATTGATCGCTAATCATATACTAATCAC
ATACATACAAATATATGAAATTTCCTACTAATTAAATAGTTGTGAAATGAATATAATTAAGAACCATGGACGCAGGAGTTTTGTTC
TTGTTTTATTGATGCAACGTCAAAAGAATAGCCCGGTACGGTTTATTGTGGTTTAGCGGTATCACGTCACATTTCAGCTGATAAAC
CAAGCCAAGAGGTGGTGTTGTTTCCGGTTTGAGGCTTTGTGGACGCTTTGGCTGGATCGTTTAACTGGTATGGTGCCTTTGATGTA
ACCCTATCCTTTCTCTTTGCCAAGAACCGATGAAGTGAAGCTCTTCTAGCAATTGGAAGTTCGCATGCCATTGCAGATGAGGAGGA
TTTGATTGGCTCTTGTGTTACGGTTTTCATGAAATGAGGAACTTGGTTTGGTGTAGGAGCGATGTTGTTGTTGTTGTTAACAGTAG
ATGTGAAACCCGTGAAGGTATTAGCGGCTCCTTTGCTAGCCAAGTTCATAACTTCTTTGGCTTTCTCAGCAGAAAAGTCATTGAAC
ACAATCACTTGCCCGCCGTAGAATATAGTTAACGGTGCAGTTTGAGGCTCTGGTTTCACAGATCTGTAGTTCCAAGTAAGCACCAC
ACATTAGTAAAAGAGATCAGGGAAAAATATTTATCAGCTTTTTTAATATATATATATATATATATGTTTAACTAATAAAAATATAT
CAGCGTTACTACATCAGAATTATATGTTTAACAGAACATACCTAGAAGTAGTCTGTGTCATTTTGGGGACATCTTCCTTGGGGAGA
GAGGAAGATGAGGAAGAAAAGCTTGGTTGCCTAGGAAACAGATTCTTGGGTTTAACATCTGGAGCAGCGGCCATGGAATCCACGTT
GGAAGCTTCACAAGGGAATAAACTCATGGTTGTTGTAGGCTTACGTGAGATGACTGCAAAACATGATCCAAAACAAGTTAGATATC
TCTGTATCTCATAACTTTTTCAATGACAATTTTGGCAAAACTTAATGGAGAAAAAAACAAAAAGCTAACTAGTTTCAAACGAATCA
GACACGCAAGCCTAACTTACAGACTCATACGCATAGAGATATATATGTAAAGACAACGAACGTGTCTAATTTCTACCTAAACTATA
GCGCTATTAATTCCAGATTAAAGAGAAGGCTCCTCCTTACCGTTGGTCTCAGGCATGCATGACATCCCTAAGCTGAGATCTCCAAA
GCTACCGTTCTCCTTCAAATACTGACTCAATCGACTACACGTTAGCGAGAAGCTCGGCTTCCCTGAGGACGATCTCCGTTTTGCAG
AGCATTCCATAGAACTCGGCATCGTTAAGCAGCTTGGAAGAAACGAAGCAAAACCACTAGAAAACGTGGCCAATCTTCTTCTTATC
TTCTTCAGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002890323 hypothetical protein ARALYDRAFT_472142 [Arabidopsis lyrata subsp. lyrata]5141e-049
NP_564075 protein TIFY 10A [Arabidopsis thaliana]4737e-045
NP_973862 protein TIFY 10A [Arabidopsis thaliana]4737e-045
AAM65383 unknown [Arabidopsis thaliana]4737e-045
NP_565096 protein TIFY 10B [Arabidopsis thaliana]4243e-039

Swiss-Prot top hits (Blast detail)Scoree value
Q9LMA8 Protein TIFY 10A4733e-046
Q9S7M2 Protein TIFY 10B4241e-040
Q9LDU5 Protein TIFY 11A2152e-016
Q9C9E3 Protein TIFY 11B1946e-014
Q9C5K8 Protein TIFY 3B1732e-011

TrEMBL top hits (Blast detail)Scoree value
Q3ED96 Uncharacterized protein At1g19180.24734e-045
B9ST81 Putative uncharacterized protein3023e-025
A5C160 Putative uncharacterized protein2971e-024
B9GVY7 Predicted protein2772e-022
C7SCY1 Jasmonate ZIM domain 12648e-021

Arabidopsis top hits (Blast detail)Scoree value
AT1G19180.1 JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1); protein binding4742e-047
AT1G19180.2 JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1); protein binding4742e-047
AT1G74950.1 TIFY10B4241e-041
AT1G17380.1 JAZ5 (JASMONATE-ZIM-DOMAIN PROTEIN 5)2152e-017
AT1G72450.1 JAZ6 (JASMONATE-ZIM-DOMAIN PROTEIN 6)1945e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  50%
 
201  50%

Unigene MembersMember information