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Information for unigene UN15876
| FASTA Sequence |
| Unigene ID: UN15876 | Length: 1121 |
SSR | | GGCTAGAACTCTCTCTCTCTCTCTCAAAGACACTCGTCTCAAAGGATCTCTGAAACCTAAAAACCAAGTTGGATCTGAGCTATATT
TCTTAATATTCTGCTATCACGACTAAAAAATCCGGAGTCATGTCGGTTTTACTTACTCTGTGTCTGGTTCTCTCCATGATTACCTA
TTCAAATGCTGCGTATTGTGTATGCAAAGACGGGAACGAGCAAGTGCTTCAGAAAGCCATAGATTACGCATGTGGAGCAGGAGCTG
ACTGTTCTCAGATCCAGCAGAACGGAGCTTGTTTCCAACCTAACACCATCAAAGCCCACTGCGACGTCGCTGTCAACAGTTACTAC
CAGAAGAAAGCTTCCTCCGGTGCCACCTGTGACTTCAACGGCGCCGCTGTTATCTCTACCTCCCCTCCGTCAACTGCTTCAAGCTG
TTTAACTGGTTCCAGCTCTAGTGGGACACCAACCACAGGAACCCCAAGCACTGGGACACCAAGCACAGGAACACCAACCACAGGAA
CCCCAAGCACTGGGACACCAACCAGTGGCTTCCCATCCACCGGGACTCCGTCAACCGGGACACCCACTACCGGAATGCCTAGCACG
GGGACTCCTTCCACTTCAACTGGCATGCCGAACTCTGGCACGCCAGCAAACGGAATGCCAACTTCGTCTTCATCATCCGTGTTCCC
TGGTACTACTCTTGGACCGACCGGGAGCGGTGGATTCGCCGATCCTAACGCTGGAGAGAAGATCTCAGTCCGAACTAACGCTGCCT
TCTTCTTACTAACCGGTGTAGCTATTATGCTTGTGGTTTAGAAGAAACATCACGGTTGGGCTGAGACTTTGCCAACGGCTTTATGA
GGTTGCGCAAATCGGATAGAGCTGCTTTATCTTTTTTTTTTCCGTTCACTTTTGCCTTTGTAGGGTTTCGAACTGGAGTTTACTAT
TATTAGGTTTGGCCGGGAGACATCATGCTGGGTTAGTAGCTAGCTAGTAATATGGGATGTACAACTTAAAAGCGAGATCTTTTGAC
GTTATTTTGTAAATTCGGAGGATGAGATGCTCTTTTGTTTCTTTGAATCTTTCTCTTTTAATACGTACCATCATGTCTCCATTATC
ACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002888713 hypothetical protein ARALYDRAFT_894710 [Arabidopsis lyrata subsp. lyrata] | 980 | 7e-104 |
| NP_564957 plasmodesmata callose-binding protein 4 [Arabidopsis thaliana] | 947 | 5e-100 |
| AAM62861 unknown [Arabidopsis thaliana] | 945 | 8e-100 |
| AAG52501 unknown protein; 45065-49536 [Arabidopsis thaliana] | 902 | 7e-095 |
| BAD43464 predicted GPI-anchored protein [Arabidopsis thaliana] | 806 | 1e-083 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q93V72 Glucan endo-1,3-beta-glucosidase-like protein At1g69295 | 970 | 4e-104 |
| Q9SD84 Glucan endo-1,3-beta-glucosidase-like protein 3 | 339 | 6e-031 |
| Q9FNQ2 Glucan endo-1,3-beta-glucosidase-like protein 2 | 329 | 9e-030 |
| O65399 Glucan endo-1,3-beta-glucosidase 1 | 244 | 6e-020 |
| Q9ZU91 Glucan endo-1,3-beta-glucosidase 3 | 221 | 3e-017 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FZD0 At1g26450 | 571 | 1e-056 |
| C6SXT0 Putative uncharacterized protein (Fragment) | 473 | 3e-045 |
| C6TG21 Putative uncharacterized protein | 471 | 5e-045 |
| B9HXJ8 Predicted protein | 451 | 1e-042 |
| A9PAS0 Putative uncharacterized protein | 441 | 1e-041 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G69295.1 PDCB4 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4); callose binding / polysaccharide binding | 971 | 3e-105 |
| AT1G26450.1 beta-1,3-glucanase-related | 571 | 7e-059 |
| AT1G18650.1 PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3); callose binding / polysaccharide binding | 369 | 2e-035 |
| AT1G13830.1 beta-1,3-glucanase-related | 366 | 4e-035 |
| AT5G08000.1 E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3); callose binding / polysaccharide binding | 339 | 6e-032 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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