RadishBase

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Information for unigene UN15886

FASTA Sequence

Unigene ID: UN15886	Length: 784	SSR
GGGAACCATCCATTGTCTTGTCTGAAAGAGAAGAAGAAGAAGACAAAAGCAGCAGCCATGGAGAACGACAGAGAAAAACAAATTTA CTTAGCGAAGCTCTCCGAGCAAACCGAACGATACGATGAGATGGTTGAAGCGATGAAGAAAGTTGCTCAGCTTGACGTGGAGCTCA CGGTGGAGGAGAGGAATCTCGTGTCTGTTGGGTACAAGAACGTGATCGGCGCGAAGAGAGCTTCGTGGAGGATACTATCTTCCATC GAGCAGAAGGAAGAGTCCAAGGGGAACGAGGAGAATGTCAAGAGGATCAAGAACTATCTCAAGAGTGTTGAAGATGAGCTTGCTAA AGTTTGTAATGACATCTTGTCTGTCATCGACAAGCATCTCATCCCTTCGTCTAAAGCTGTCGAATCTACAGTCTTTTTCTACAAAA TGAAAGGAGATTATTATCGGTATCTGGCAGAGTTTAGTTCTGGTGATGAACGCAAGGAAGCTGCAGAGACTGGTTTAGCACCCACG CATCCAGTTAGACTTGGCCTGGCGCTGAACTTTTCTGTTTTCTACTATGAGATCTTGAACTCTCCTGAAAGTGCATGTCAATTGGC TAAGCAAGCATTTGATGATGGAATCGCTGAGCTTGATAGTCTAAACGAGGAATCATACAAAGACAGCACTCTTATCATGCAGCTAC TTAGAGACAATCTCACTTTGTGGACTTCTGACCTCCCAGAGGAAGGAGACGAGCCATCCAAAGTGATGAGCCTCAAGAAGAGAAAT GAATCCTGAA

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_564167 14-3-3-like protein GF14 epsilon [Arabidopsis thaliana]	697	2e-071
NP_849698 14-3-3-like protein GF14 epsilon [Arabidopsis thaliana]	697	2e-071
NP_973884 14-3-3-like protein GF14 epsilon [Arabidopsis thaliana]	697	2e-071
XP_002893217 hypothetical protein ARALYDRAFT_313117 [Arabidopsis lyrata subsp. lyrata]	695	4e-071
ADO95305 14-3-3-like protein GF14 Epsilon [Eutrema salsugineum]	695	4e-071

Swiss-Prot top hits (Blast detail)	Score	e value
P48347 14-3-3-like protein GF14 epsilon	697	1e-072
P93212 14-3-3 protein 7	622	6e-064
Q9S9Z8 14-3-3-like protein GF14 omicron	603	9e-062
P93214 14-3-3 protein 9	578	7e-059
Q96453 14-3-3-like protein D	572	3e-058

TrEMBL top hits (Blast detail)	Score	e value
B9DFR1 AT1G22300 protein	697	2e-071
Q3ED73 Putative uncharacterized protein At1g22300.3	697	2e-071
C0KJK4 1433-1	666	7e-068
A9PBC6 Predicted protein	645	2e-065
A1XJ43 14-3-3-like protein	630	1e-063

Arabidopsis top hits (Blast detail)	Score	e value
AT1G22300.1 GRF10 (GENERAL REGULATORY FACTOR 10); ATP binding / protein binding / protein phosphorylated amino acid binding	697	1e-073
AT1G22300.2 GRF10 (GENERAL REGULATORY FACTOR 10); ATP binding / protein binding / protein phosphorylated amino acid binding	697	1e-073
AT1G22300.3 GRF10 (GENERAL REGULATORY FACTOR 10); ATP binding / protein binding / protein phosphorylated amino acid binding	697	1e-073
AT1G34760.1 GRF11 (GENERAL REGULATORY FACTOR 11); ATPase binding / amino acid binding / protein binding / protein phosphorylated amino acid binding	603	8e-063
AT1G34760.2 GRF11 (GENERAL REGULATORY FACTOR 11); ATPase binding / amino acid binding / protein binding / protein phosphorylated amino acid binding	603	8e-063

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


11	1			50%


10	1			50%

Unigene Members	Member information