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Information for unigene UN15911
| FASTA Sequence |
| Unigene ID: UN15911 | Length: 1143 |
SSR | | GGACTGATCCTCCCTCTTTCCCATGGCCAAGCCATCCTCCTCTCTTCTCCCCAAATCCCAATAACAAAACTCTCCTCTCTCTCTCT
CTCTCTCTTCCAATCTTCAGATTCGAAATGGCTGCAGCAATCGCTTCTCTCTCCTTTCCGGCGCTGGGCCAATCCGCAAAGATCTC
CAATTCAACCACGCCTTCTCTTCCTCTCGCCTCCGTCTCCTCCATCTCCAGGAGGATTTCTCGCCACTCTTTGACTTCTTCTTCTT
CTTCTAGGGCTTCGAAACTAATCATCCACTGCATGTCTAGTGTTACGGATGTGCCACCTGTATCGGAGACGAAGTCAAACTTCCTA
AAAGCGTACAAGCGACCAATCCCCAGCATCTACAACACCGTCCTCCAGGAGCTCATCGTACAGCAGCATTTGATGAGGTATAAAAA
GACTTACCGTTACGACCCTGTTTTCGCCCTCGGCTTCGTCACCGTCTACGATCAGCTCATGGATGGCTATCCCAGCGATCAGGATC
GTGATTCCATTTTTCAAGCCTACGTCCAAGCTTTGAATGAGGATCCTAACCAATACCGAGCTGATGCGCAGAAGATGGAGGAATGG
GCGCGAAGTCAGACTTCTGCTTCACTAGTTGACTTCTCGTCTAAGGAGGGAGAAGTCGAAGCGATTCTTAAGGACATTTCAGAAAG
AGCTGGGAGTAAGGAGGGTTTCAGTTACAGCAGGTTCTTCGCTGTTGGCTTGTTTCGCTTGCTTGAGCTTGCAGGTGCTACTGATC
CCACCGTCCTTGACAAGCTTTGTGCATCCCTAAATATCAACAAGAAAAGTGTGGATCGGGACCTCGATGTGTATCGCAACCTGCTT
TCAAAGCTTGTCCAAGCCAAGGAACTACTCAAGGAGTATGTCGAGAGGGAGAAGAAGAAGCGAGGGGAAAGAGCCGAATCCCAGAA
AGCTAACGAATCCATCTCCAAGTCTCTGGGAGATAATAGCTTATCTTTCTTGGTTTAATGGATATCATAAACAATCAATTTGTGAA
TTTTTTTGTTTTGTTATTGTTCTTAGTAACAACTGCAACTACTTGACCTAAGACATACGTGTGCTCACATTCCTAAGAACAAATAT
ATCTCTTTCGATTTTATGAGTTTAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABV89647 chloroplast light-regulated protein [Brassica rapa] | 1242 | 3e-134 |
| XP_002884230 hypothetical protein ARALYDRAFT_900469 [Arabidopsis lyrata subsp. lyrata] | 1226 | 2e-132 |
| NP_565491 protein THYLAKOID FORMATION 1 [Arabidopsis thaliana] | 1199 | 3e-129 |
| AAM64943 unknown [Arabidopsis thaliana] | 1186 | 9e-128 |
| XP_002275686 PREDICTED: hypothetical protein [Vitis vinifera] | 1055 | 1e-112 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SKT0 Protein THYLAKOID FORMATION 1, chloroplastic | 1203 | 4e-131 |
| Q7XAB8 Protein THYLAKOID FORMATION1, chloroplastic | 1003 | 6e-108 |
| Q84PB7 Protein THYLAKOID FORMATION1, chloroplastic | 957 | 1e-102 |
| Q8DJT8 Protein thf1 | 346 | 1e-031 |
| Q31MY4 Protein thf1 | 343 | 2e-031 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8IXS3 Chloroplast light-regulated protein | 1242 | 2e-134 |
| A7XZB8 Chloroplast-localized protein | 1037 | 1e-110 |
| B9I6H1 Predicted protein | 1018 | 2e-108 |
| C6T9W9 Putative uncharacterized protein | 1011 | 1e-107 |
| B9RW80 Protein THYLAKOID FORMATION1, chloroplast, putative | 997 | 5e-106 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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