Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN15913

FASTA Sequence
Unigene ID: UN15913Length: 556 SSR 
GGAGTTAAGATTTATTGAAAAACGTATCTGTTGTTTCAAATGGACAGACAATATCCGATTATAACAAAGTTATTACACCAGAGTTT
TCATATCTCTCTCCCCCCTCTCTCTCTCTCTGGTCTCTAAACTCATTCGCCCTGAGCAGCTCCTCCATCTTCACCGGATGGAGCAC
ATGGAGACTTCCTGTAACGCGTCTGCTGCTGCGTTGGCTGTAACTTGGGACGAAGAGCTTCTAAGGGTCCCTTTGGCTTAGCAACA
CCTTGCTTTCCAAGAGCCCAATCAGCTGAGTCAAAGTATGCTCGTTCATGATCCTTGGAAATGAGAGGTGGTTTCTTTGGCATGAG
TCCTCCATACTTGTTCTTTACAGCAGCCTCCTCTTGCTGTGATGATGGCATTGAATTATCTGCGTCATTGGTGAGGTTCCCTTGCT
CTTTCGCATCCTCTACGCTTGACATTTCTGATGATGTCTCCTCAACGCCCACCAAAATCAGGAGGAAGGATTCGCGATTGGCTCCT
ATTGTTGGTTGCGACGTTTCTCTGTTGATGTTGTTGTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568985 cAMP-regulated phosphoprotein 19-related protein [Arabidopsis thaliana]5186e-051
XP_002866597 hypothetical protein ARALYDRAFT_496610 [Arabidopsis lyrata subsp. lyrata]5089e-050
XP_002270339 PREDICTED: hypothetical protein [Vitis vinifera]4326e-041
ACJ86154 unknown [Medicago truncatula]4201e-039
ACU14268 unknown [Glycine max]4173e-039

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q93Z49 AT5g64130/MHJ24_115184e-051
B7FN21 Putative uncharacterized protein4201e-039
C6SYE5 Putative uncharacterized protein4172e-039
A5ATI8 Putative uncharacterized protein4163e-039
A9PDR8 Predicted protein4111e-038

Arabidopsis top hits (Blast detail)Scoree value
AT5G64130.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69510.3); Has 93 Blast hits to 93 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).5183e-053
AT5G64130.2 unknown protein3096e-029
AT5G64130.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69510.3); Has 91 Blast hits to 91 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3087e-029
AT1G69510.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64130.1); Has 92 Blast hits to 92 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2782e-025
AT1G69510.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64130.1); Has 92 Blast hits to 92 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2782e-025

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information