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Information for unigene UN15917
| FASTA Sequence |
| Unigene ID: UN15917 | Length: 1540 |
| SNP | GGAACTCTTTGTTTGCCATTTGTTGCAAACACTCAAGTCTCTTCACGCAGAGTTAAGTCTTCTTCAAGTTCCCAGGGATCCAAGCT
TGAAACAAAATGGCGCAAATCTTGGCAGCTTCTCCAACATGTCAAATGAAATTGACTAAACCGAGCCCCATTGCATCTTCAAAGTT
ATGGAGCTCGGTTGTGTTGAAACAGAAGAAACAGAGCAGCAGCAAACTAAGAAGCTTTAAAGTGATGGCTCTCCAATCTGATAACA
GTACAATCAATAGAGTTGAGAGTCTTCTCAATTTAGACACCAAACCTTTCACTGACCGGATCATCGCTGAGTACATTTGGATTGGA
GGATCAGGAATTGACCTTAGGAGCAAGTCAAGGACTCTTGAAAAGCCTGTGGAAGATCCTTCTGAGCTTCCCAAGTGGAACTATGA
TGGTTCCAGTACCGGGCAAGCACCTGGTGAAGATAGTGAAGTGATTCTATATCCGCAAGCTATCTTCAGAGATCCTTTCCGTGGAG
GCAATAACATATTGGTTATCTGTGATACTTACACACCCGCTGGTGAGCCAATTCCAACAAACAAACGTGCAAGAGCTGCTGAGATT
TTCAGCAACAAGAAGGTCAATGAAGAGATTCCATGGTTTGGCATCGAACAAGAGTACACTTTACTTCAGCCAAATGTGAACTGGCC
ATTGGGTTGGCCCGTTGGAGCGTATCCTGGTCCTCAGGGACCTTACTACTGTGGAGTCGGAGCTGAAAAGTCATGGGGACGTGACA
TTTCAGATGCTCATTACAAAGCTTGTTTATATGCTGGAATTAACATCAGTGGTACTAATGGTGAAGTTATGCCAGGACAGTGGGAA
TTCCAAGTTGGCCCGAGCGTAGGAATCGAAGCAGGTGATCATGTTTGGTGTGCAAGATACCTTCTTGAGAGAATCACAGAACAAGC
TGGTGTTGTCTTAACACTTGATCCCAAACCAATAGAGGGAGACTGGAACGGTGCTGGTTGCCATACCAATTACAGTACTAAAAGCA
TGAGAGAGGAAGGAGGATTTGAGGTGATTAAAAAGGCCATCTTGAACCTCTCGCTTCGTCACATGGAGCACATCAGTGCATACGGT
GAAGGCAATGAGAGAAGGTTGACCGGAAAGCACGAGACAGCTAGTATCGACCAATTCTCATGGGGCGTGGCTAACCGTGGATGCTC
AATTCGTGTGGGACGTGATACCGAGAAGAAAGGAAAAGGTTACTTGGAAGATCGACGTCCAGCATCAAACATGGACCCATACATTG
TGACTTCACTCTTGGCAGAGACCACTCTTCTCTGGGAGCCGACCCTTGAGGCTGAAGCACTTGCAGCTCAAAAGCTTTCTTTGAAT
GTTTAAATTAACTATGTAGCCCTGCCGCGATCATAAATGTTGTTATAAAATGTTGGTTCGGACAATACATTCTGTGTTTTCTTTTT
TTTCATTTGCATTGTTGAAAATACTCAAAACTTCATGATGGGCAGTGTTCATCCTTTTATATTGGTTTTTAGGGTCTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAA73062 plastidic glutamine synthetase precursor [Brassica napus] | 2251 | 4e-251 |
| Q42624 RecName: Full=Glutamine synthetase, chloroplastic; AltName: Full=GS2; AltName: Full=Glutamate--ammonia ligase; Flags: Precursor | 2250 | 6e-251 |
| ABY87178 chloroplast glutamine synthetase [Brassica rapa subsp. chinensis] | 2246 | 2e-250 |
| CAB72423 glutamine synthetase [Brassica napus] | 2229 | 2e-248 |
| XP_002868428 hypothetical protein ARALYDRAFT_493621 [Arabidopsis lyrata subsp. lyrata] | 2145 | 9e-239 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q42624 Glutamine synthetase, chloroplastic | 2250 | 2e-252 |
| Q43127 Glutamine synthetase, chloroplastic/mitochondrial | 2135 | 5e-239 |
| P15102 Glutamine synthetase leaf isozyme, chloroplastic | 1938 | 4e-216 |
| P08281 Glutamine synthetase leaf isozyme, chloroplastic | 1930 | 3e-215 |
| O22506 Glutamine synthetase, chloroplastic | 1924 | 2e-214 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O04851 Glutamine synthetase | 2251 | 3e-251 |
| B3TJX9 Glutamine synthetase | 2246 | 1e-250 |
| B9DGD1 Glutamine synthetase | 2135 | 8e-238 |
| B9RST2 Glutamine synthetase | 1988 | 9e-221 |
| B5LAU9 Glutamine synthetase | 1986 | 2e-220 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G35630.1 GS2 (GLUTAMINE SYNTHETASE 2); glutamate-ammonia ligase | 2136 | 3e-240 |
| AT5G35630.2 GS2 (GLUTAMINE SYNTHETASE 2); glutamate-ammonia ligase | 2136 | 3e-240 |
| AT5G35630.3 GS2 (GLUTAMINE SYNTHETASE 2); glutamate-ammonia ligase | 2136 | 3e-240 |
| AT5G37600.1 ATGSR1; copper ion binding / glutamate-ammonia ligase | 1558 | 4e-173 |
| AT1G66200.1 ATGSR2; copper ion binding / glutamate-ammonia ligase | 1553 | 1e-172 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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