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Information for unigene UN15919
| FASTA Sequence |
| Unigene ID: UN15919 | Length: 834 |
SSR | | ACTTCAACAAAGAGAAAGAGAGAGAGAGCGAAACCCTAATATCTCTGATCGTAAAAAGAGAGAAACTAACTTTACTTCAATTCCCT
TTTTTCGATTAGCTCACGATGGCGTTCCGAAACTGTCGGTGGGAGCTCCTCGCTGCTTCTCTAGCCCTGACTTTAGCTCTGATTCA
CCACCCGGTGGTGGATGCGAACTCGGAAGGAGATGCCCTTTACGCTCTTCGCAGGAGCTTATCGGATCCAGACCATGTGCTCCAGA
GCTGGGATCCAACTCTTGTTAACCCTTGTACCTGGTTCCATGTCACCTGTAACCAAGACAGCCGCGTCACTCGTGTGGATTTGGGT
AATTCAAACCTTTCATGACATCTTGCACCTGAGCTTGGGAAGCTCTAGCATTTACAGTATTTGGAGCTGTACAAAAACAACATCAA
AGGGACTATACCTTCTGAACTAGAAAATCTGAAGAACCTCATCAGCTTGGATCTGTACAACAACAATCTTACTGGGAAAATCCCTT
CTTCTTTGGGGAAATTGAAGTCTCTGGTCTTTCTGTAAGTAAATGTGTAAGAAAGTTATACCTATAGTCAGTCATATTAGCTTTGA
AAATTGCAAATTAATTCAGAAAAAAATTGTGCTGCAATTTTCTCAAAAGGTTTATGCTAGTTGCTAGTTGCTAGTTGTTCATCATT
TGATATGATTCAGTACCTGATTATCTTCATACCCTGCCTGTAAAAAAATCTGTTTAATGTTGCAGACGGCTCAACGACAACCAATT
GACTGGACCAATCCCTAGAGAACTCACGAAAATCCCAAGCCTTAAAGTTGTTGATGTATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_197608 leucine-rich repeat-containing protein [Arabidopsis thaliana] | 668 | 6e-068 |
| NP_189960 leucine-rich repeat-containing protein [Arabidopsis thaliana] | 611 | 3e-061 |
| BAD44554 unnamed protein product [Arabidopsis thaliana] | 597 | 1e-059 |
| AAP23944 leucine-rich repeat protein [x Citrofortunella microcarpa] | 568 | 2e-056 |
| XP_002314247 predicted protein [Populus trichocarpa] | 563 | 9e-056 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q94F62 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 | 444 | 3e-043 |
| Q94AG2 Somatic embryogenesis receptor kinase 1 | 442 | 5e-043 |
| Q9XIC7 Somatic embryogenesis receptor kinase 2 | 438 | 1e-042 |
| Q9SKG5 Somatic embryogenesis receptor kinase 4 | 404 | 1e-038 |
| Q8LPS5 Somatic embryogenesis receptor kinase 5 | 367 | 2e-034 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FPJ5 AT5G21090 protein | 668 | 4e-068 |
| Q6NQP4 At3g43740 | 611 | 2e-061 |
| Q67XM7 MRNA, complete cds, clone: RAFL25-33-L05 | 597 | 7e-060 |
| Q84N26 Leucine-rich repeat protein | 568 | 2e-056 |
| A9PHC2 Predicted protein | 563 | 6e-056 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G21090.1 leucine-rich repeat protein, putative | 668 | 3e-070 |
| AT3G43740.1 leucine-rich repeat family protein | 611 | 1e-063 |
| AT4G33430.1 BAK1 (BRI1-ASSOCIATED RECEPTOR KINASE); kinase/ protein binding / protein heterodimerization/ protein serine/threonine kinase | 444 | 2e-044 |
| AT1G71830.1 SERK1 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1); kinase/ transmembrane receptor protein serine/threonine kinase | 442 | 4e-044 |
| AT1G34210.1 SERK2 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 2); kinase | 438 | 1e-043 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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