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Information for unigene UN15920
| FASTA Sequence |
| Unigene ID: UN15920 | Length: 882 |
| SNP | GGAAGCCTCACAAAACATTTTGATTTACTTTTCTCAATTGTCACTGTAATATTACATGACGAGTAACAAAATCCCATAAGACAAAG
CAAACAAACAAACAATTCTTACAAGAAGAGGAGTAGCAGGCTACCTCTGGAGACTTAAGACAGCAAAAGACTGATGTTGGGTTTGG
TGCCTCATTTAAAAGTAGAGAGACGAGGAAGTTTGTCCCTCAGATAGTAAAGTCTTGCTCTTCTCACTTTCCTGTGGCTTACCACT
TTTATCTCCTTTATGTTGGGTGAGTATAAAGGAAAGACGATTTCAACGCCAATGCCAGCAATGATTCTCCGGATACGAATAGTAGT
GTGGATGCCTGCGTTTTGCCTAGACATCACTATCCCTTTGTAGATTGATAACCTACGCCTGTTCTCAGGTACTTCCAGTTTGATCT
CTACAATGTCCCCTGTCCTAATCTCTGGAACCGGTCTTACTTTCTCTGAAACCTCAATTGCTTTCTGGTTCAGTATCCCCATGACA
TCTCCGAGCTTGGTCCTTGGCTTCCACGGAGTTTTTGCTTCCTCGACCTCAGTGTCTTCTACTGTTTCAGCAACATCCTCCGGAAC
TGCTTCAGTGTCTTCACCTACAGTACTGCTCTCTTCGGCTTTAGCTATAAACTCCCTTCGCTTCCTGGAACCGATTGCGAATCCAA
AGTTCGAGCTGGAATGGTTTAGGGAAACCCTAGACAATGATATCCGAGAGTTCACTGATGGTATAAATGAAGAAACTCCTAGATTC
TTACTTGGGATTCTCGGTATCATATGCAGTGCCTGAGGAAGAAGAAGATGAGAGCTAGTCGCCATGTTTGCAGAGTACGAAGCCTT
ATCAGCTTCTGCGTTTTAGCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABD64915 plastid ribosomal protein L19, putative [Brassica oleracea] | 865 | 1e-090 |
| AAM64533 contains similarity to plastid ribosomal protein L19 [Arabidopsis thaliana] | 861 | 3e-090 |
| NP_568677 50S ribosomal protein L19-2 [Arabidopsis thaliana] | 858 | 6e-090 |
| BAA97152 unnamed protein product [Arabidopsis thaliana] | 825 | 4e-086 |
| XP_002870097 ribosomal protein L19 family protein [Arabidopsis lyrata subsp. lyrata] | 823 | 7e-086 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8RXX5 50S ribosomal protein L19-2, chloroplastic | 858 | 3e-091 |
| Q8W463 50S ribosomal protein L19-1, chloroplastic | 804 | 5e-085 |
| P82413 50S ribosomal protein L19, chloroplastic | 593 | 2e-060 |
| B8HT34 50S ribosomal protein L19 | 236 | 4e-019 |
| Q2RJV3 50S ribosomal protein L19 | 232 | 1e-018 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2A9V6 Plastid ribosomal protein L19, putative | 865 | 7e-091 |
| Q2A9H1 Plastid ribosomal protein L19, putative | 777 | 1e-080 |
| A5B2A3 Putative uncharacterized protein | 648 | 1e-065 |
| B4YYC4 ST10 (Fragment) | 600 | 4e-060 |
| C6T030 Putative uncharacterized protein | 597 | 8e-060 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G47190.1 ribosomal protein L19 family protein | 859 | 2e-092 |
| AT4G17560.1 ribosomal protein L19 family protein | 805 | 4e-086 |
| AT5G11750.1 ribosomal protein L19 family protein | 370 | 1e-035 |
| AT4G11630.1 ribosomal protein L19 family protein | 357 | 3e-034 |
| AT1G24240.1 ribosomal protein L19 family protein | 344 | 1e-032 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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