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Information for unigene UN15950

FASTA Sequence
Unigene ID: UN15950Length: 909 SSR 
GGAAAAAAAATTAAATCAATATCTCGCAACAAATAGTTTGCACCACAAAGAAAACCAACACACACACACGCACTCTGTTACATTCA
CCAATAAATCCTCAAACCGAACCAATACAAAACCCAACTTCTACGCTTTTGTCTGCAAATTTATATTTTATATACCAAAGTAGTCG
CACTCACTCGTTGAACACATTGAAAGACTTGTTCTTGCTTTTTCCAAAATCAAGCTGCGAGTACGATGATCACGATCAGGAGTACA
ATGCCAAATATCACCAAGAGCAAGCATGTCAGAGATGAGTTTGATCTTTGTGTTTTGGAGGCTTGAGCGAGCTGAGATTTTCCTTG
AGCAGTTGCAGCTCGAGAGTTGTCAATGTGAGTACCAATATCATCTATCATGACTCCTTGATCGTTAACAAGAACCGCAATCTCGT
TGTCTAACAACACAAGTTCCTGCCTTTTTGATTCCATAACTTGTGCCCTCTGTTCAGGAATATTGTCTACTTCACTCGCTGTATAG
CTAGAGGGAAGAGAAGAAGGAGGGAGGAGAGGAGCATAAGCGGTTTCTCTTTCAGCAGCAGTCTGTTGAGCTTTCTGAAACTCTTT
CAACACAGCTTGAAAGTCCTTTGCAAGCTTAGCATCTGCAATCTTCTTACTTGCATTGACACGGGTTCGATGATCAGTTTCACTAG
CTTCTTTAAGCTTAGCAGAAGTGTCCTTCACAAGCTGACCAATATGCAACCGTGTCTTGTGCAGCTTGTCACGGAGCTCGGGGGTA
TCTTTGGGAGTACCGAGCGTGTTAACGAGCCGCTGAAAGGTGGAGACACCGGTGTTGATCTGGAAGATACCGGAAGCGACGGCTTG
CGTCGAATCTTGGCGACCACCTCCATTCATCTTCCTCGATCTTCCTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568671 syntaxin-22 [Arabidopsis thaliana]7028e-072
XP_002863386 hypothetical protein ARALYDRAFT_494291 [Arabidopsis lyrata subsp. lyrata]6947e-071
XP_002870088 hypothetical protein ARALYDRAFT_493104 [Arabidopsis lyrata subsp. lyrata]6302e-063
NP_567537 syntaxin-23 [Arabidopsis thaliana]6274e-063
NP_001078403 syntaxin-23 [Arabidopsis thaliana]6274e-063

Swiss-Prot top hits (Blast detail)Scoree value
P93654 Syntaxin-227024e-073
O04378 Syntaxin-236272e-064
Q39233 Syntaxin-214515e-044
Q9C615 Putative syntaxin-243243e-029
O70257 Syntaxin-71836e-013

TrEMBL top hits (Blast detail)Scoree value
A8MS65 AT4G17730 protein6273e-063
Q3HRZ4 Syntaxin-like protein6264e-063
Q25BM0 Syntaxin, putative6221e-062
B9MU58 Predicted protein6174e-062
Q8LJR4 Syntaxin6174e-062

Arabidopsis top hits (Blast detail)Scoree value
AT5G46860.1 VAM3; SNAP receptor7023e-074
AT4G17730.1 SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptor6272e-065
AT4G17730.2 SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptor6272e-065
AT5G16830.1 SYP21 (SYNTAXIN OF PLANTS 21); SNAP receptor4514e-045
AT1G32270.1 ATSYP24; SNAP receptor/ protein binding3242e-030

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information