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Information for unigene UN15954

FASTA Sequence
Unigene ID: UN15954Length: 777 SSR 
TGTATCACATATCTGCTACGATGGCATTACACAATATTGAAACTTCACCAATTTCTAAACCAAACTAAAAAATTACAAAGAAATAG
AAAGAAAACTAACTACACTTCACATTTACCAAAAACATCATATTGTTAGACAGTTTAAGATAACAGTAAACAGCAGACAAACTTGA
TTTACTGCTGCTTCTGTAGTAATAAGTTGCCACACTGCCATTTTTTCATTTCTGTCTTGAAATCATCATCACTACTATTATTATTG
TAAAATAACTGAAACAGCTGAAGAAGATTCATCTCCTCTCATCGGTCTCTATGATAAGATACACCTTCAAGCTTTAACGCAGCAGT
TGAAGCAGCTGAAGATTCCTCTCCTCGCAGATGGAGAAAGTGGCTGGTGATGAGAGAAGTCATTGTGGGTTTTGTTGTTGTTGTTG
TTGTTGTCACCGTGAACAGTGGTGAGCTTAGGCTTAGCATTATCAACCGAAGTAGGTTGATTATGAAAAGGATTAACGAGTTCTTC
CTCGTTGCCAAGACTGGCACGAGAAGGATCTCTCTTGTTCTGTTTCCGCATCTCTCTGATCTTAGAGAAATCCATAGAGTAATCAG
GAATGGTTCCTCCTTTCTGATCCCAATCTCCAAACTGTGGTACTGATAGCCATGGCGAGTTCTTGTTCTCCTTTGGATCTTCCATA
TGATCAAATCTGTAGAGAGTAGTAGTAAAGAATCCTCCTTTTCTGAATTAACTTTTTCAATCAAAAGAAGAAGAAGATGATGATCT
TCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864926 hypothetical protein ARALYDRAFT_496705 [Arabidopsis lyrata subsp. lyrata]4742e-045
NP_568998 uncharacterized protein [Arabidopsis thaliana]4624e-044
AAM64656 unknown [Arabidopsis thaliana]4615e-044
ACK44531 AT5G09960-like protein [Arabidopsis arenosa]3281e-028
XP_002871394 hypothetical protein ARALYDRAFT_908947 [Arabidopsis lyrata subsp. lyrata]3201e-027

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q0WN19 At5g648504623e-044
Q8LBN9 Putative uncharacterized protein4614e-044
B7U9U8 AT5G09960-like protein3281e-028
Q67XU1 At5g099603144e-027
Q8LF39 Putative uncharacterized protein3144e-027

Arabidopsis top hits (Blast detail)Scoree value
AT5G64850.1 unknown protein4901e-049
AT5G09960.1 unknown protein3197e-030
AT5G19473.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Defence response, Rin4 (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09960.1); Has 39 Blast hits to 39 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1468e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information