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Information for unigene UN15959

FASTA Sequence
Unigene ID: UN15959Length: 1229 SSRSNP
CATCAAAGACTGATCGGGTTCCAGCATTTCGCAAGGAATGCTATATTTGCAGAAACCAATTATGAATCAACACATTAAATCACGCT
ATCAATAACAAATGTCGATAAGGAATCAACAAACGCTTTTAAAAAGGCATTCTACTCGTTCTTCCAAGCATACAGAATCAACGAAA
AACCAGAACTTTGAGACTTGGAGTTTGTTGTTGTTGTTGCTGCCATGATATCCTCTGAGAAAGAAGACAAGCTCTTATCCGAAGAA
GACTGACTAGTCCTGAACATAAACACTGCGTTTCCCGCTGTAGAAGAAGGCATCCCAAATAGCCAACTATGAACATCCCACAGAAC
TTCCACAGCCATTCTATTAACAACTATCGTATCGTTCCCACGGAACTTCCACTTAAGCCGCTTCACCTGCAACAACGTCTTCCCAT
CCACACGAACGACGAGACAAGGATCAGTGACGCTCGTGTCACATTCAATCACAACATCATGTATTCTAACCCCATCTGAACAGAGC
TGAGCCTTCGTTGTGAACTCTTTCTTACCAAAAACATGCTCTTTCTTGGCGATGAACACAGCGCCTCCCAGAGACGAAGGCGAAGA
AGCGTTCGTCTTCTTGAAAGCTTCCTTCTTCATATCACCGAGAAGCAGAACCATCTCCCTGTCAACAACAACACCCAAATAGAATC
CTCCCAAAGCTTCGGGTCCTGACCCGAACTTCGCAGACGCCAGATCCCAGTAAACATCGACGCTACAACACGAATAAACCTCCAAA
CTCTTGGACCCTTTTCGTTTGGTGAACAGCCAGGGCTTGATCTCGACTTTACAGAGGCTCTGGTTACGAGAATCATCAACACCAAC
GGTCACACTCTGACCCATCAGAGTCTTGGCCCACGTCACAGTGATCAAACAAGTGCTTCCTCGGATACAGCACTGGTAGATAGAAG
TAACCAGATTCTGAGCGTTCTTCCCGGAGTTCGAAGACGAAGAATCCGCGACTTGGACTCCGTTTTCGCCGAAGCAAGAAGGAAAA
TCCTTCATCTCTCTATAAAACTTCCAATTCAGCTCTCTGAAGACTCAGATGAATCAAGAATGCATCTAAATCTGAGGAACACTCAC
ACAAGTCTCGTTGATTGGATCCGTTGTCTCCAAGGATTTTGATAAAGCCAGAGAGTAAGGAGAGAGAGAGAGAGAGGAGGAAGGAA
GGAAGAATATTTTTTCCTTCGATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002872306 hypothetical protein ARALYDRAFT_489643 [Arabidopsis lyrata subsp. lyrata]12092e-130
NP_198167 uncharacterized protein [Arabidopsis thaliana]11742e-126
XP_002884475 hypothetical protein ARALYDRAFT_477757 [Arabidopsis lyrata subsp. lyrata]10685e-114
NP_566240 uncharacterized protein [Arabidopsis thaliana]10579e-113
AAM65821 unknown [Arabidopsis thaliana]10498e-112

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8RX84 AT5g28150/T24G3_8011786e-127
Q9CAV2 AT3g04860/T9J14_1910576e-113
Q8L9Q9 Putative uncharacterized protein10495e-112
B9RER7 Putative uncharacterized protein10461e-111
B9MZF9 Predicted protein10308e-110

Arabidopsis top hits (Blast detail)Scoree value
AT5G28150.1 unknown protein12341e-135
AT3G04860.1 unknown protein10573e-115
AT4G12690.1 unknown protein5143e-052
AT2G04220.1 unknown protein5036e-051
AT5G48270.1 unknown protein4704e-047

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
64  50%
 
93  38%
 
111  13%

Unigene MembersMember information