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Information for unigene UN15972

FASTA Sequence
Unigene ID: UN15972Length: 1085  SNP
GGAAAACAAAACGGAGAAAGAAGGGGAAACGCAACAGTGAGTGAGAGAGAGATGAACCACATGCACACCACCAAATGTCTGCTTCT
TCTTTATTTAATTTCCCATTGATTCGCCTCAGATCTGTCTCCCATCTCCCTCCGTCATCTCTCCGATCCGTTTCTCAGAGAAAGTT
ACCGACTTTTCGAGCTTTCTCCGGTACTACCACAATGACAGATGCTGGAATGGATGCTGTTCAGAGACGCCTCATGTTCGAAGACG
AATGCATTCTTGTTGACGAAACTGATCGTGTTGTGGGGCATGACAGCAAATATAATTGTCATCTGATGGAAAATATTGAAGCTAAG
AATCTGCTTCACAGGGCTTTTAGTGTATTTTTATTCAACTCCAACTATGACTTGCTTCTCCAGCAAAGGTCGAAAGCAAAGGTGAC
CTTCCCTCTAGTGTGGACAAACACTTGTTGCAGCCATCCTCTTTACCGTGAATCTGAGCTTATCGAGGAAAATACTCTCGGTGTGA
GGAATGCTGCACAGAGAAAGCTTCTTGACGAGCTCGGTATTGTAGCTGAAGATGTACCAGTCGATGAGTTCACTCCTCTGGGACGT
ATGCTTTACAAGGCTCCTTCTGATGGCAAATGGGGAGAGCACGAACTGGACTACTTGCTGTTCATTGTGAGGGATGTTAAGGTCCA
ACCAAATCCGGACGAAGTAGCGGATATCAAGTATGTGAGCAGGGAAGAGCTGAAGGAGCTGGTGAAGAGAGCTGATGCAGGGGAGG
AAGGTTTGAAACTATCTCCATGGTTCAGATTGGTGGTGGATAACTTCTTGATGAAGTGGTGGGATCATGTTGAGAAAGGCACTTTG
AGTGAAGCTGTAGACATGAAAACCATTCACAAGCTTTGAACTCTTTTTCCCTATGTTTTTTTTTTTTTCTGGATAACCTCTCTGTT
TTTTTATCTCTGTTTTTTATATTTTTGTTGCGAGACTTTTAGATATTCCAAGCAAGTCACGCACTGAAGTTTCTTTTTTTTTTTCA
AATTTGGATTTATGAATTATCTTTCAATAATCGAAGTTTGAATTTTACATTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAF36996 isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase [Brassica oleracea var. botrytis]12477e-135
XP_002884339 hypothetical protein ARALYDRAFT_477520 [Arabidopsis lyrata subsp. lyrata]12243e-132
NP_186927 Isopentenyl-diphosphate Delta-isomerase II [Arabidopsis thaliana]12182e-131
AAF29979 isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase [Arabidopsis thaliana]12092e-130
NP_197148 Isopentenyl-diphosphate Delta-isomerase I [Arabidopsis thaliana]11492e-123

Swiss-Prot top hits (Blast detail)Scoree value
Q42553 Isopentenyl-diphosphate Delta-isomerase II12187e-133
Q38929 Isopentenyl-diphosphate Delta-isomerase I11319e-123
Q39471 Isopentenyl-diphosphate Delta-isomerase II10994e-119
Q39664 Isopentenyl-diphosphate Delta-isomerase II10799e-117
O48964 Isopentenyl-diphosphate Delta-isomerase I10753e-116

TrEMBL top hits (Blast detail)Scoree value
Q9M592 Isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase12475e-135
Q9M6K3 Isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase12091e-130
Q9M6K2 Isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase (Fragment)11346e-122
Q6EJD1 Isopentenyl pyrophosphate isomerase11167e-120
Q9M6K8 Isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase (Fragment)11078e-119

Arabidopsis top hits (Blast detail)Scoree value
AT3G02780.1 IPP2 (ISOPENTENYL PYROPHOSPHATE:DIMETHYLALLYL PYROPHOSPHATE ISOMERASE 2); isopentenyl-diphosphate delta-isomerase12195e-134
AT5G16440.1 IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1); isopentenyl-diphosphate delta-isomerase11505e-126

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  10%
 
122  20%
 
113  30%
 
92  20%
 
62  20%

Unigene MembersMember information