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Information for unigene UN15973
| FASTA Sequence |
| Unigene ID: UN15973 | Length: 890 |
| SNP | GGAACTCTTTCTCACACACTCTGTTTCGATTGAGAAGAAGCGATCACGAAGATGGCGAGACCAACCTCCATTCTCTTCCTCACGCT
ACTCCTCTTCGCTGCTCTGGCTTTGATCCAGGCAAAGGAAGATTTAAAGGAGATCACTCACAAAGTTTACTTCGATGTTGAGATTG
ACGGCAAAGAAGCTGGTCGAGTTGTTATTGGCCTATTCGGCAAGACAGTTCCCAAAACTGCAGAAAACTTCAGAGCTCTTTGCACT
GGGGAGAAAGGTGTTGGGAAGAGCGGGAAGCCTCTACACTACAAGGGGAGCAAGTTCCATAGAATCATTCCTAGTTTTATGATCCA
GGGAGGTGACTTCACCCACGGAAACGGTATGGGTGGAGAATCCATCTATGGTCAGAAGTTTGCTGATGAGAACTTCAAGCTCAAGC
ATACCGGACCAGGTTTTCTTTCGATGGCAAACTCTGGTGAGGACACAAACGGTTCGCAGTTTTTCATCACGACGGTGACAACAAGC
TGGTTAGATGGAAGGCATGTGGTGTTTGGGAAAGTGGTACAAGGAATGGATGTTGTCTACAAGATTGAAGCTGAGGGGAAGCAAAG
TGGAACTCCTAAGAGCAAAGTTGTTATTGCTGACAGTGGAGAGCTTCCTCTCTAAATCCTAAGCACTTCTTCTTCATGAAGAGGAT
TGTGGGGTTTTTAAGTTGTTTTGTATTTTAAACACACTCGAATGCTATCCAACCGAACAAAAGCACTTCAGTTTCAGAGCTTTTTT
TTAATAAATCATTTTCTAAATAGATTTTGTGACTTTTGCGTATGTTTTTTCTGTGAGATTTGTTTTTCTTCTTCATGAAGAGAAGT
AGGTTTTTAAGTTATATACTTACTGTTACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002881077 cyclophilin [Arabidopsis lyrata subsp. lyrata] | 982 | 3e-104 |
| AAB71401 cyclophilin [Arabidopsis thaliana] | 974 | 2e-103 |
| NP_180557 Peptidyl-prolyl cis-trans isomerase CYP19-4 [Arabidopsis thaliana] | 973 | 3e-103 |
| AAM63088 cyclophilin [Arabidopsis thaliana] | 968 | 1e-102 |
| ACU13170 unknown [Glycine max] | 919 | 6e-097 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LDP4 Peptidyl-prolyl cis-trans isomerase CYP19-4 | 973 | 1e-104 |
| Q9SP02 Peptidyl-prolyl cis-trans isomerase CYP20-1 | 903 | 2e-096 |
| Q9TW32 Peptidyl-prolyl cis-trans isomerase B | 694 | 3e-072 |
| P52015 Peptidyl-prolyl cis-trans isomerase 7 | 678 | 2e-070 |
| P52010 Peptidyl-prolyl cis-trans isomerase 2 | 652 | 2e-067 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6SV97 Peptidyl-prolyl cis-trans isomerase | 919 | 4e-097 |
| A9PAQ9 Peptidyl-prolyl cis-trans isomerase | 889 | 1e-093 |
| B9SI28 Peptidyl-prolyl cis-trans isomerase | 885 | 3e-093 |
| B6TIP7 Peptidyl-prolyl cis-trans isomerase | 874 | 6e-092 |
| B6VEG9 Peptidyl-prolyl cis-trans isomerase | 873 | 8e-092 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G29960.1 CYP5 (CYCLOPHILIN 5); peptidyl-prolyl cis-trans isomerase | 974 | 9e-106 |
| AT5G58710.1 ROC7; peptidyl-prolyl cis-trans isomerase | 904 | 1e-097 |
| AT3G55920.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | 748 | 2e-079 |
| AT4G38740.1 ROC1 (ROTAMASE CYP 1); peptidyl-prolyl cis-trans isomerase | 643 | 2e-067 |
| AT2G21130.1 peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase | 633 | 3e-066 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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