RadishBase

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Information for unigene UN15985

FASTA Sequence

Unigene ID:UN15985

Length: 638

GTGTTGTTCAAAAAAAAAAAGTATTGGTTGTTAACGGACTAATACCAAGACTTCTGAATAATGGTTCAGAGTTAAAAGTAGCAAGT
TTGAAAAGCTTTATGATAAATGGTAACACAGTGAAGCAACGTTTGATCAATATCTCTAACAAAACACGAAAACACAACATGGTTTT
TAGAGCATAAAGCTGATTTGCAAGAGCGAACCAAAACTTGAAAAGAGTTCCAATCAAAACACAGAAGACTAAGATGTTTACTTCTT
CTTCTCAGTAGTAGCACCTCCACCAGACCTCATTTTGCGGAGAACACTAGACATCTCCTCTCTCTTTCGCTTGGCTCTCTTGTGGG
TACCCAACTTCCTCTTGGCAACCTTAAGAGCCCTCTTGTCTTTACCAACCTTGAGAAGCTCAGTGATTCTCTTCTCGTATGGAGCA
AATCCAGCTACTTCCCTGATCAGTGATCTGATGAACAACGTCCTCTTGCTCGTTTTCCCTTTGCGAGAGTTAGGACGAGGAGCCAA
CTCGCGTCTTGTGACGACGTGTCCTTTGTTCAGACCAACGAACAAACCAGTCTTCACTTGTGGTGTTGCCATTGTTTTCTCTTCTT
CTCGGATCGACCTTCAGCCGCTGCAGAAAACAACCC

Annotation(GO term)

GenBank top hits (Blast detail)	Score	E value
NP_850697 60S ribosomal protein L36-2 [Arabidopsis thaliana]	521	4e-051
XP_002881517 60S ribosomal protein L36 [Arabidopsis lyrata subsp. lyrata]	508	1e-049
NP_181296 60S ribosomal protein L36-1 [Arabidopsis thaliana]	505	3e-049
XP_002877939 60S ribosomal protein L36 [Arabidopsis lyrata subsp. lyrata]	505	3e-049
XP_002870974 60S ribosomal protein L36 [Arabidopsis lyrata subsp. lyrata]	483	1e-046

Swiss-Prot top hits (Blast detail)	Score	E value
Q9M352 60S ribosomal protein L36-2	521	2e-052
O80929 60S ribosomal protein L36-1	505	1e-050
Q9LZ57 60S ribosomal protein L36-3	472	9e-047
P52866 60S ribosomal protein L36	335	7e-031
Q9LRB8 60S ribosomal protein L36	314	2e-028

TrEMBL top hits (Blast detail)	Score	E value
A9PCN6 60S ribosomal protein L36	469	3e-045
A2Y5F8 60S ribosomal protein L36	464	1e-044
Q6L510 60S ribosomal protein L36	464	1e-044
A9P9I5 60S ribosomal protein L36	462	2e-044
A9PD00 60S ribosomal protein L36	462	2e-044

Arabidopsis top hits (Blast detail)	Score	E value
AT3G53740.2 60S ribosomal protein L36 (RPL36B)	522	1e-053
AT3G53740.3 60S ribosomal protein L36 (RPL36B)	522	1e-053
AT3G53740.4 60S ribosomal protein L36 (RPL36B)	522	1e-053
AT2G37600.1 60S ribosomal protein L36 (RPL36A)	505	1e-051
AT2G37600.2 60S ribosomal protein L36 (RPL36A)	505	1e-051

EST library breakdown for ESTs in the assembly


10	5			16%


6	9			28%


8	7			22%


7	1			3%


9	3			9%


20	2			6%


12	4			13%


11	1			3%

Unigene Members