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Information for unigene UN15988
| FASTA Sequence |
| Unigene ID: UN15988 | Length: 1008 |
| SNP | GATCTATTAAAAATACATAAATCTAACAAATGCTTAATTATCCTTCAATAACAGTATTATTTAGATATTTTTTCTTCAAAATAAGC
AATAATTACTACAAAAGAGATAATTGATTCCCAATATATTTTACTGTATTTCTCTAGAAAACCATAGAAACACGTAAGAGAAACTT
GATAGATGTTTTAAAGGGCTTCTTGAAGAGTTCCTGCTTCACCTGCCATTTAAGCATTGGAAACTCTGATATTATCATCAGTCCGT
GAGGCTGAAGATGAATATTTGTGGTATCTATCTAATTGCTCAAAGTTGAAGACAAGTAGAAGTTCCAAAACACAGAACCCATTGAC
ATGAAAGCTACACGAGCTTGAAGCGGCACTACCCAAAAGTTAAGTATGCTAACAGGAACCCAGAAGCGCAACCCATAAAGGAGCGT
TGGAAGAGCATCTTTCTGATACTTGTTTCCAAGCTCAGAGATCTTTCCCAGCCACAAGTTGTTCCAAGCGAATATAACAGCGATCA
CAGATGGACCGAGGATCACTTGGTTAAGCACAACCTTAAGCACAATATTGGTCGCGGTTGGTTTTGGCAAAGAACGGTCAAGGTAC
TGATACCATGCATAAGAACCAGGACCGTACAAGAGAAACCCATAACTACTCATCCTCAGTGCACGAACCCAGTCATGTTCTGAGAA
AATGTTCCACAGTTCCTCCTCGTCTGGTTTATCAGAAGACGATTGTTTAAGAGCGGCGGCTCTCTTCTTCCACCTCCCAGACAACT
GAGCAATCGTGTCACCGGTGAAAGTGAGCGCACCGGCCGTCACAGCTTGCTTTAACGGAAAACGATAGCCACTGGAGTCTCTGCTC
ACGTCGACGGAATCGGAAGATCCAGAGTTCCTTTGATTGCGTCTATCGCCGGAAGAGTTGTTCTTCTTCTTCCTCCGTTGATTGAA
GCCGTTCCATCCCCAGAAACCGTTAGCGCCGCCGCAACCACCCAATGCGTCCATTACAAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_565983 peroxisomal membrane-22-like protein [Arabidopsis thaliana] | 1111 | 4e-119 |
| XP_002881872 peroxisomal membrane 22 kDa family protein [Arabidopsis lyrata subsp. lyrata] | 1107 | 1e-118 |
| XP_002530204 Peroxisomal membrane protein, putative [Ricinus communis] | 747 | 6e-077 |
| XP_002332407 predicted protein [Populus trichocarpa] | 746 | 8e-077 |
| XP_002277601 PREDICTED: hypothetical protein [Vitis vinifera] | 742 | 2e-076 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q7SCY7 Protein sym-1 | 174 | 7e-012 |
| P42925 Peroxisomal membrane protein 2 | 166 | 6e-011 |
| Q07066 Peroxisomal membrane protein 2 | 159 | 4e-010 |
| Q06563 Protein SYM1 | 153 | 2e-009 |
| Q4WDZ0 Protein sym1 | 140 | 6e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SJH9 Expressed protein | 1111 | 3e-119 |
| B9SW35 Peroxisomal membrane protein, putative | 747 | 4e-077 |
| B9NAX1 Predicted protein | 746 | 5e-077 |
| C5XJ24 Putative uncharacterized protein Sb03g033650 | 664 | 2e-067 |
| Q5JNF1 Os01g0730800 protein | 646 | 2e-065 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G42770.1 peroxisomal membrane 22 kDa family protein | 1112 | 1e-121 |
| AT5G43140.1 peroxisomal membrane 22 kDa family protein | 194 | 3e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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