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Information for unigene UN15995

FASTA Sequence
Unigene ID: UN15995Length: 1857  SNP
GGGCCTAGCCAAGTATCTCATCTTTCTCCTTCTTTCTTTCGTAAATAAAATCACACATCACTCACCTCTACTCCTCAATCAGTATC
TTCAAAATATATTTTGGAGCGTGAGAGACAAATTTTGTTTCATCTTTACGATTTCACCAGAGATGATAAAGTTTCAAGGACTCGTT
TCATCGACCTTTGTCCTCTTACTGACCCTCTCTCTGTGTTCTGCCGAAAATGATGTTTTTTCTTCCACAGGGTATGTCCAAATTGA
GTGCTTGAGAGTACCGCCGTTGGAGTTCGCCGGAGCGGCAAAAACCGCCTTCGACTCAGTCAGGAAAGCCGGAGCTTTAGTGTCGA
AATTCGACAAGAAATTTGGGAACTCACGTGTGGGCCATGCCATTCTTGATTGCCTTGATCTTCTTGATTCTGCCTCTGAAGAGCTT
TCTTGGATTATATCTGCCTCTCAGAACCCCAACGGTAAAGACAATAGTACAGGAGACGTGGCTTCGGATCTAAGGACGTGGATAAG
CGCCGCCCTTTCTAACCAGGACACCTGTCTTGACGGCTTCGAGGGCACTAATGGAATTGTCAAAAAAGTTGTGGCCGGTGGTCTAA
GCCAGGTCGGTAAAACCATCCGAAACCTACTAACAATGGTCCACTTTTCCTCCAAACCCAAACCTAAGCCCAATAGAGCCCACAAG
ACAACCACCGGTCATAGCGGCTTCAGTAAGTTTCCCACATGGGTTAGACCCGGTGATCGGAAGTTGCTACAAATTGATGGCTTATC
AATAGCGGCCGATGCATTTGTAGCAGCAGATGGGACAGGGAACTTCACTACGATAAGCGAGGCGGTACTGGCCGCGCCGGACTACA
GTACAAAAAGATATGTGATACATGTGAAAAGAGGTATATATGTCGAGAATGTAGAGATTAAGAAGAAGAAATGGAACATTATGATG
GTCGGTGACGGCATTGATGCCACCGTGATCACCGGCAACCGAAGTTTCATCGACGGTTGGACTACGTTCCGTTCTGCTACTTTTGC
TGTGAGCGGGAGAGGATTTCTCGCACGGGACATAACGTTTCAAAACACAGCAGGACCGGAAAAACATCAGGCAGTTGCAATCCGGT
CAGACTCGGATCTCGGAGTTTTTTACCGATGTGCGATGAGAGGTTATCAAGATACTCTCTACGCCCACACAATGCGTCAATTCTTT
AGAGAATGCATTATAACGGGCACCGTGGATTTCATGTTTGGAGACGCTACAGCTGTATTTCAAGACTGTCAAATCAAAGCAAAACA
AGGCCTACCAAACCAGAAGAACAGCATCACGGCTCAAGGACGTAAAGATCCTAACCAGCCAACCGGATTCATGATCCAATTTAGTA
ACATAACGGCTGACACAGACCTACTTCCAAACTTAAATACCACTGCTACTTACCTGGGTCGGCCATGGAAACTATATTCTAGAACA
GTGTTCATGCAAAACTACATGAGTGATGTGCTCAAGCCCGAAGGATGGCTCGAATGGAACGGCAATTTTGCGTTGGACACGTTGTA
CTATGCCGAATATATGAACAACGGACCGGGGGCTAGCCTTGACCGTCGTGTTAAGTGGCCAGGGTACCATCTGTTGAATAATTCGG
CAGAAGCTATCAACTTTACGGTGGCACAGTTCATAAAAGGGAACTTATGGCTGCCTGCAACTGGTATCAAATACATTGCTGGTCTA
TCTTCGTAAATTAATCAAGTTGGATATAACCCCTTTCATATAGATGTCTATGTTTTCTTTCTCATTTTACTGTATTTATTATATAC
AGTTTCTGTAAAAGTTGAACTGCTCTATAAGTTTAATACTCCCTTTGTTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002877272 pectinesterase family protein [Arabidopsis lyrata subsp. lyrata]23313e-260
NP_189913 pectinesterase 32 [Arabidopsis thaliana]23232e-259
XP_002270616 PREDICTED: pectin methylesterase PME1 [Vitis vinifera]17472e-192
CBI29628 unnamed protein product [Vitis vinifera]17443e-192
ABK92470 unknown [Populus trichocarpa]17184e-189

Swiss-Prot top hits (Blast detail)Scoree value
Q9LXK7 Probable pectinesterase/pectinesterase inhibitor 3223231e-260
Q9SMY7 Probable pectinesterase/pectinesterase inhibitor 4414133e-155
Q43062 Pectinesterase/pectinesterase inhibitor PPE8B13892e-152
O04886 Pectinesterase 111123e-120
Q9M3B0 Probable pectinesterase/pectinesterase inhibitor 3411052e-119

TrEMBL top hits (Blast detail)Scoree value
Q94B16 Pectinesterase17471e-192
A9P7W7 Pectinesterase17182e-189
B9MT57 Pectinesterase17147e-189
A5AUK1 Putative uncharacterized protein15722e-172
A0ZNK2 Pectinesterase13625e-148

Arabidopsis top hits (Blast detail)Scoree value
AT3G43270.1 pectinesterase family protein23247e-262
AT4G33220.1 enzyme inhibitor/ pectinesterase14133e-156
AT3G05620.1 pectinesterase family protein11534e-126
AT3G49220.1 pectinesterase family protein11052e-120
AT5G53370.1 PMEPCRF (PECTIN METHYLESTERASE PCR FRAGMENT F); pectinesterase10998e-120

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
74  44%
 
62  22%
 
92  22%
 
81  11%

Unigene MembersMember information