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Information for unigene UN16000
| FASTA Sequence |
| Unigene ID: UN16000 | Length: 1217 |
SSR | | GGATACAAGGTGGTTGCTTTGCTCTGCCTCTGCGATGATGATGATGATGACAAGAAGAAGAGTCTCAACAACCTCGTCTCTATCCG
CCACAGCTTTCGGATCATTTATGAAATGGTCCTTCAAATCTTGTAAGTTTCACGGCGAGTCCCTAGATTCCTCTGTCTCCCCACTT
CTCATCCCCGGCGTCCACGTCTTCCATTGTCCGGATGTGGTTGGGATTGTAGCGAAGCTATCAGATTGCATTGCTGCAAAGGGAGG
CAACATTCTTGGTTACGATGTGTTTGTTCCTGAGAACAATAACGTCTTCTACTCTCGAAGCGAGTTCATTTTTGATCCAGTGAAGT
GGCCAAGGAGTCAGATGAGTGAAGATTTTCACACTATTGCAAAGAAATTCAATGCTATGAGCTCTGTTGTACGAGTCCCCTCTTTA
GACCCCAAGTACAAGATTGCTCTTTTACTCTCTAAACAGGACCATTGTCTGGTTGAAATGTTACATAAATGGCAGGACGGAAAGCT
TCCTGTTGATATAACATGTGTGATAAGTAATCATGAAAGAGCTCCAAACACACATATTATGCGCTTTCTCCAGAGGCATGGCATCT
CCTATCATTATTTGCCAACAACTGATCAGAACAAGATAGAGGAGGAGATTTTTGAGTTGGTCAAGGATACCGATTTTATTGTTCTC
GCTAGATACATGCAGGTACTGTCTGGTAACTTCTTGAAAGGTTATGGAAAAGATGTTATCAACATACACCATGGCCTCTTACCATC
ATTCAAAGGGAGAAGCCCAGCAAAACAGGCATTTGATGCAGGTGTGAAACTAATTGGTGCAACCACTCACTTTGTTACTGAGGAAC
TTGATTCAGGTCCTATCATTGAACAAATGGTTGAGAGAGTTTCCCACCGAGACAACTTGACGAGCTTTGTCCAAAAATCAGAGGAC
CTCGAGAAGAAGTGCCTAATGAAAGCTATAAAATCTTACTGCGAACTCCGAGTATTGCCTTACGGTACACACAAGACTGTTGTATT
CTGATACCCCCACAAATTCAAAAAACTCTCACATGATTCTTCATCATACAAGCAAGGTCATACATACCAACCACTCTTTAAGATTT
CTGATTTTTCATAGCTTACACGTCCATTGTCTTGTCTTTAGCAAATCAGAAACTCTTTCATTGGAAATAAAAAGTTTAACAGAGAT
CAATCCTTCTCTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002868072 hypothetical protein ARALYDRAFT_493141 [Arabidopsis lyrata subsp. lyrata] | 1601 | 7e-176 |
| NP_193467 Formyl transferase [Arabidopsis thaliana] | 1598 | 2e-175 |
| ABD64983 formyltetrahydrofolate deformylase, putative [Brassica oleracea] | 1434 | 2e-156 |
| NP_568682 putative formyltetrahydrofolate deformylase [Arabidopsis thaliana] | 1431 | 4e-156 |
| XP_002865119 hypothetical protein ARALYDRAFT_494236 [Arabidopsis lyrata subsp. lyrata] | 1420 | 7e-155 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q55135 Formyltetrahydrofolate deformylase | 490 | 2e-048 |
| O34990 Formyltetrahydrofolate deformylase | 486 | 6e-048 |
| P0A5T7 Formyltetrahydrofolate deformylase | 407 | 9e-039 |
| P0A5T6 Formyltetrahydrofolate deformylase | 407 | 9e-039 |
| Q46339 Formyltetrahydrofolate deformylase | 392 | 5e-037 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2A9S5 Formyltetrahydrofolate deformylase, putative | 1434 | 1e-156 |
| Q93YQ3 Formyltetrahydrofolate deformylase-like | 1431 | 3e-156 |
| Q2A9D5 Formyltetrahydrofolate deformylase, putative | 1361 | 3e-148 |
| B9GYC5 Formyltetrahydrofolate deformylase | 1203 | 7e-130 |
| B7FHP0 Putative uncharacterized protein | 1202 | 9e-130 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G17360.1 formyltetrahydrofolate deformylase/ hydroxymethyl-, formyl- and related transferase/ methyltransferase | 1599 | 5e-178 |
| AT5G47435.2 formyltetrahydrofolate deformylase, putative | 1432 | 1e-158 |
| AT5G47435.1 formyltetrahydrofolate deformylase, putative | 1432 | 1e-158 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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