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Information for unigene UN16005
FASTA Sequence |
Unigene ID: UN16005 | Length: 1029 |
| SNP | ATGTCCGAGAGCCGGTCACAAATTTTCTAGATCAGCAAAAGACAAGGACCACAAGCTTACGATGATTTCTTTTATTAAGACAGAAC
ATCAAATCAACTGACACATATTTCCCATACATTAATTGTTTTAAAAACATTACATTAGCTGATAATATTCTATTTTCCGGGGACGA
AGTTGGTGGCGTAAGCCCAGGCATTGTTAGCCACAGGGTCCGCAAGATGGTCAAACAGATTCTCAATTGGTCCTTTACCAGTGACA
ATGGCCTGGACAAAGAAACCAAACATGGAGAACATAGCAAGCCGACCGTTCTTAAGCTCCTTCACTTTCAATTCTGAAAACGCCTC
TGGATCCTCAGCTAAGTTCAACGGGTCAAACGCCCCTCCTGGGTAAAGCGGGTCAAGGCCTTCACCAAGAGGTCCACCTCCGATTC
TGTACCCTTCGATCAACCCCATCAGCACAACTTGAGAAGCCCAGATAGCTAATATGCTCTGCGCGTGGATCAAGTTAGGGTTTCCG
AGGTAGTCAAGCCCTCCTTCTGAGAAGATCTGAGACCCTGCCTTGAACCACACGGCTTCGCCGAATTTAACACCGTTTTTGGAGAG
GATCTCTGGGAATGTGCAACCTAATGCGCCGAGCATTGCCCATCTGCTGTGGATTACTTCAAGCTCACGGTTCTTTGCGAAGGTTT
CTGGGTCGGCCGAGAGGCCAGCTGTGTCCCAGCCGTAGTCTCCGGGGTATTCTCCGGTTAGGTATGATGGTGTGTTCTCTGAGAAT
GGCCCTAAGTACTTGGGACGGTCTGGTCCGTACCAGATGCTCTGAGGAGTTGACTTGACGGTACGGCGCATGACGACGCGACCACC
ACCGTTGGAAGCTCCGACTTTGCGGAGGAGATCGTTGGAGGACTTCAGGGCCGTTTGGCCGGCAAAAGAGGAGTGTTGGATTGCTG
ATGTGGCCATTTCTTGTATTCTCTGACTCCCAAGCAAACACACAAATGAAGAGATGAATAAGCAAAGAAGAGATGGCTCCCCT
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GenBank top hits (Blast detail) | Score | e value |
BAJ33772 unnamed protein product [Thellungiella halophila] | 1402 | 7e-153 |
NP_189406 photosystem II light harvesting complex protein 2.3 [Arabidopsis thaliana] | 1387 | 4e-151 |
XP_002875397 LHCB2:4 [Arabidopsis lyrata subsp. lyrata] | 1387 | 4e-151 |
XP_002875398 LHCB2:4 [Arabidopsis lyrata subsp. lyrata] | 1378 | 4e-150 |
AAD28771 Lhcb2 protein [Arabidopsis thaliana] | 1349 | 1e-146 |
Swiss-Prot top hits (Blast detail) | Score | e value |
P27494 Chlorophyll a-b binding protein 36, chloroplastic | 1279 | 5e-140 |
P27518 Chlorophyll a-b binding protein 151, chloroplastic | 1274 | 2e-139 |
P12062 Chlorophyll a-b binding protein 37, chloroplastic | 1264 | 3e-138 |
P12328 Chlorophyll a-b binding protein of LHCII type I, chloroplastic | 1240 | 2e-135 |
P14278 Chlorophyll a-b binding protein 4, chloroplastic | 1225 | 1e-133 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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