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Information for unigene UN16010

FASTA Sequence
Unigene ID: UN16010Length: 1727  SNP
GGGAACCAAGACCATTGACTTGATCAAATCTGGTTTCCCCCAGGGCAAGTACCTCTTTGCTGTGTTGTTGATGGAAGGAACATCTG
GGCCAATGACCTTGCTGCCCCTCTCATCACCTTGCAGTCACTTGAGGGTGTTGTTGGTAAAGACAAGCTTGTTGTGTCAACCTCTT
GCTCTCTTCTTCACACTGCTGTTGACCTTATTAACGAGACTAAGCTTGATGCTGAAATCAAGTCTTGGCTGGCATTCGCTGCTCAG
AAGGTTGTTGAAGTTGATGCATTGGCCAAGGCTTTGGCTGGTCAGACTAATCAGAGCTTCTTCTCTGCCAACGCAGAGGCTTTGTC
TTCAAGGAGGTCTTCTCCAAGAGTCACCAACCAGTCTGTCCAGAAGGCTGCTGCTGATTTGAAGGGATCAGACCATCGCCGTGCTA
CTGAAGTTACCGCAAGACTAGATGCTCAGCAGAAGAAGCTTAACCTACCAATCCTCCCAACCACAACCATTGGTTCCTTCCCACAG
ACCGTGGAACTCAGGAGGGTTCGCCGTGAGTACAAGGCCAAGAAAATCTCTGAAGAGGATTACGTCAAGGCCATCAAGGAAGAGAT
CAAGAAGGTTGTTGACATCCAAGAGGATCTTGATATCGATGTTCTTGTCCATGGAGAGCCTGAGAGAAACGACATGGTTGAGTACT
TTGGAGAGCAGTTGTCAGGTTTTGCATTCACAGCAAACGGATGGGTTCAATCCTACGGATCTCGTTGTGTGAAGCCACCGATCATC
TACGGTGACGTGAGCCGTCCCAAGCCAATGACAGTCTTCTGGTCTTCAACAGCTCAGAGCATGACCAAACGTCCCATGAAAGGTAT
GCTTACAGGACCAGTCACGATTCTGAACTGGTCTTTTGTCAGAAACGACCAGCCTAGGCACGAGACGTGCTACCAGATCGCTTTGG
CTATCAAAGATGAAGTGGAAGACCTAGAGAAAGGCGGTATTGGAGTGATTCAGATCGATGAAGCTGCGCTTAGAGAAGGGTTGCCT
CTTAGGAAAGCAGAACACTCTTTCTACTTGGACTGGGCTGTTCATTCTTTCAGAATCACTAACTGTGGTGTTCAAGACAGTACTCA
GATCCACACTCACATGTGCTACTCACACTTTAATGACATCATCCACTCCATCATTGACATGGACGCTGATGTTATCACCATTGAGA
ACTCTCGTTCAGATGAGAAGCTTCTCTCTGTGTTCCGTGACGGAGTGAAGTACGGTGCAGGTATTGGTCCTGGTGTTTACGACATC
CACTCGCCGAGAATCCCATCCGCGGATGAGATTGCAGACAGGGTCAACAAGATGCTTGCGGTTCTTGAGAAGAACGTCTTGTGGGT
TAACCCTGACTGTGGTCTGAAGACGAGGAAGTACACTGAGGTTAAGCCAGCACTTAAGAACATGGTTGATGCGGCCAAGCTTATCC
GCTCCCAGCTCTCCAGTGCCAAGTGAAGAGGCTTGAAGAAGACATTATATTTCATGGTTTGTGTTTTTGCTTGATTTCAATAACTT
TTCTTCCAAGAAAATATAGTAGCCAAAATTAGGTTTTGATGAAATATGTACCTCTCTGTTTTTCTTTTGCAATGTTATATTATGTA
CGTATCTTTGTTTTCTCTGGCCACTTGAATGAGAATGGCGATTTTTATATTCAAGGAAATGGTTGTGTATTTGACATACTCAATCT
TCTTATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_187028 methionine synthase 2 [Arabidopsis thaliana]23716e-265
AAK64167 putative methionine synthase [Arabidopsis thaliana]23681e-264
XP_002882307 hypothetical protein ARALYDRAFT_477628 [Arabidopsis lyrata subsp. lyrata]23662e-264
BAJ33898 unnamed protein product [Thellungiella halophila]23635e-264
NP_197294 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Arabidopsis thaliana]22972e-256

Swiss-Prot top hits (Blast detail)Scoree value
O50008 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase22971e-257
Q42699 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase22002e-246
P93263 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase21732e-243
Q42662 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase21526e-241
B4EJ37 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase14384e-158

TrEMBL top hits (Blast detail)Scoree value
Q9SRV5 Cobalamin-independent methionine synthase23714e-265
Q94BN4 Putative methionine synthase23689e-265
Q93ZK3 AT5g17920/MPI7_6022972e-256
Q6KCR2 Cobalamin-independent methionine synthase22891e-255
Q8H162 Putative 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase22854e-255

Arabidopsis top hits (Blast detail)Scoree value
AT3G03780.1 AtMS2; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase/ methionine synthase23722e-267
AT3G03780.2 AtMS2; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase/ methionine synthase23722e-267
AT3G03780.3 AtMS2; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase/ methionine synthase23722e-267
AT5G17920.1 ATMS1; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase/ copper ion binding / methionine synthase22987e-259
AT5G17920.2 ATMS1; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase/ methionine synthase22987e-259

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
115  33%
 
96  40%
 
62  13%
 
102  13%

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