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Information for unigene UN16014
| FASTA Sequence |
| Unigene ID: UN16014 | Length: 1285 |
| SNP | GGATAGTCAATACTAGCGAAGCTGAGGAAATCTGAGAAAGAAGGAAGGAAGGAAGGATGAAGAAGATATCGGTGGTTCTCATGGTC
TGTGGAGGCGTTGGCCGACAACTTCTGCAACACATTGTCTCTTTCCGATCCCTACACGCCAAAATGGGAGTTCATATACGGGTGAT
TGGAGTCAGTGACAGTAAATCCTTACTTGTTCCAGTGGATGTGGTCAAAGAGGAACTTGATGATGATCTCTTGTCTGTTGTTTGCC
GTCTCAAATCTGCTGGTTCTCCGTTATCCACGCTTGGTGCTTTAGGTAAAGGTGAATATCGTGTGTTCAGTGGTTCTGAGTCAAGG
AGAGAAACAGAAGCAGTTGCACAACTTCTGGGTAAATCTGCAGGCTTAGTTGCTGTGTTGTCCTAACAAATAAGAAGCCCCTTACT
TCCACACTGGAACATTATGACAAATTGGTTTTGGATCCTCGACGTATCCGCCATGAATCCACTGTTGGTGCTGGGCTTCCTGTCAT
TGCATCCATGAACCGTATAATTTCATCCGGAGATCCTGTTCATAGCATTGTCGGTAGTTTGAGCGGTACCTTGGGATATGTAATGA
GTGAGCTTGAAGATGGAAGGCCTCTAAGCCAAGTTGTTCGAGCTGCTAAGACGCTGGGGTATACTGAACCAGATCCACGTGGATGA
CCTTAGTGGCATGGATGTTGCTAGAAAGGGTTTGATTCTTGCTCGACTTCTTGGTAAGAGGATAATTATGGATAGCATTAAGATAG
AGAGCTTGTACCCTGAAGAGATGAGACCTGGAGTGATGACTGTGGATGATTTCCTCGAGAATGGAATAGCAAAACTTGATCAGAGC
ATTGAGGAGAGAGTTAAAAGAGCTTCATCAAACGGGTGTGTGCTTCGTTATGTTTGTGTGATTGAGGGCTCAAGCGTTCAAGTTGG
CATTCGAGAAGTTCCAAAAGATTCTCCATTAGGACGACTAAGAGGCAGTGACAATATAGTAGAGATACGTAGCCGTTGCTACAAGG
AGCAGCCTTTGGTGATTCAAGGTGCTGGAGCCGGGAACGACACAACTGCAGCCGGTGTTCTTGCAGACATCATCGACATGCAGGAT
CTTTTTCCTTGAGAGAGCATGTGATCTGGTCATCATATCACAGTAATAATAAACCTAATTTTCAAAGGATTTGTTTTTTATTCATC
ACAAAAGATAGTCTTTGCCAACGAGATCATGGCCTCTCCTTAGACTGCAATAAAAAAAAAAGCTTTTTTTTTTGCCTTGAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002874030 homoserine dehydrogenase family protein [Arabidopsis lyrata subsp. lyrata] | 697 | 5e-071 |
| NP_197605 glyceraldehyde-3-phosphate dehydrogenase-like protein [Arabidopsis thaliana] | 678 | 9e-069 |
| NP_001031916 glyceraldehyde-3-phosphate dehydrogenase-like protein [Arabidopsis thaliana] | 678 | 9e-069 |
| AAM61538 homoserine dehydrogenase-like protein [Arabidopsis thaliana] | 678 | 9e-069 |
| NP_001031917 glyceraldehyde-3-phosphate dehydrogenase-like protein [Arabidopsis thaliana] | 674 | 3e-068 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P00562 Bifunctional aspartokinase/homoserine dehydrogenase 2 | 263 | 5e-022 |
| P27725 Bifunctional aspartokinase/homoserine dehydrogenase 1 | 252 | 9e-021 |
| P49080 Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic | 250 | 2e-020 |
| P00561 Bifunctional aspartokinase/homoserine dehydrogenase 1 | 249 | 2e-020 |
| P49079 Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic | 249 | 2e-020 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q84JZ4 Homoserine dehydrogenase | 678 | 6e-069 |
| Q8LF92 Homoserine dehydrogenase | 678 | 6e-069 |
| Q2V358 Homoserine dehydrogenase | 674 | 2e-068 |
| B9MYR6 Homoserine dehydrogenase | 592 | 5e-059 |
| B9S6K6 Homoserine dehydrogenase | 571 | 1e-056 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G21060.1 homoserine dehydrogenase family protein | 678 | 3e-071 |
| AT5G21060.2 homoserine dehydrogenase family protein | 678 | 3e-071 |
| AT5G21060.3 homoserine dehydrogenase family protein | 674 | 9e-071 |
| AT1G31230.1 AK-HSDH I (ASPARTATE KINASE-HOMOSERINE DEHYDROGENASE I); aspartate kinase/ homoserine dehydrogenase | 248 | 2e-021 |
| AT4G19710.2 bifunctional aspartate kinase/homoserine dehydrogenase, putative / AK-HSDH, putative | 247 | 3e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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