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Information for unigene UN16053
| FASTA Sequence |
| Unigene ID: UN16053 | Length: 1933 |
SSR | | GATCAATCTCTCTCTTTCTCCTCCGACCATCCTTAACTCTCTCCCGCCTTTTTCAACCATCTCGCGCTAGCTCTCAGATGGCGGAT
TCGCAGGCGAAGTCGTCGGGGATGAGTCCCGGAGTAGGAGGCGGCGGAAGCCACGAGAGCGGCGGAGATCAGAGCCCGAGGTCGAT
GAACGTTCGTGAGCAGGATAGGTTCCTCCCGATCGCTAACATAAGCCGAATCATGAAGAGGGGTTTGCCTGCTAACGGGAAGATCG
CTAAGGATGCTAAAGAGACGATGCAGGAATGCGTCTCTGAGTTCATCAGCTTCGTCACCAGCGAAGCGAGTGATAAGTGTCAGAGG
GAGAAGAGGAAGACTATTAATGGAGATGATTTGCTTTGGGCTATGACCACTTTGGGATTCGAAGAGTACGTTGAGCCCCTCAAGTT
TTACCTGACGAGATACAGGGAGATGGAGGGTGACAACAAGGGATCAGGAAAAGGCGGGGAATCGAGTGCTAAGAGAGATGGTCAAC
CAAGCCAATTTCTGCAGCATGGTCAGCAGCAAGGCTCTTTCTCACAGGGTCATTATGGAAACTCTCAAGGCTCTTCGCATATGATG
GTTCAAATGCCGAACGCAGAGTAGTAGTAGAAGAATATTCATCACAATCTCTGGAGATTCATCTATTCATGTTCTTGTGTCTGAGA
TCATATATTTGAATTGTGGTATCTCTGTACATGATTGTGTTGTAGTAGTTTGCTCAAAAGATGAGAATTGAGAAGCAACTTTGTTT
CTACATTTGATTGTTTTAGTTTCTTTAACTTTCGGTCTTAAGAAGAAAGCCTTATTGATTTATTTGCACTTGCTTTGGCTTTGTTT
CATTAAAAAAAAACAATTAGTTTTATATTTGTTCTACACTTGAATTCAGTGGTGTGGTGTCTACGGGGGGAGTGAAGGATATATAC
TGATACGGTTTAGTTGGAATTGGTTGGGGTTTATAAATCTGGGTTCAAGAATTAGAGTGAACCGACTGATTACATCCTTAAAAAGT
ACCTAAACCGGAAAAAACCGGAAAAAACCGAATCGATCCAGGGATTGGGAAGAAACAACTAACCGCGCTCACTAACTCAAAAACCC
TCGATCTCTTGAGATAGGTGGGAAGAAAAGGAATCACTTGTTCATTCAAAATCTCAAAATCAGTGGGGGGATCTGGGGTCATTTCG
ATTAGTCATCTCAATTCTCTCTCTCTCTCTGTTGATGGAAGATAACGAGAACAAGAAAAGCGAGGGCGAGGTCGATGGCCTTGGTC
TGATTGATGTCGCTGCTGAGGACGATAGCCTCCTCTTCTCCTCCTTTCCTAATCCCACCAGCTACGAGTTTTCCGAGGCAGATGAG
GATGAGAAGTGTTTGAAAGAAGAAAAGGATCGAGCTTTCTTGAGGGAGACAGAGCCCTGCGATGATGATGAAGAGACACTGGTATC
TTCAGTAGAAGAGAAGGAAGATATGCTTCAACCTCGTGAGTCGCCTGAGCCTCAGAAGGTGATCAAGAGTGGGAAGTATAACTTGC
GCAAGAGTCTTGCTTGGGACAATGCCTTCTTCACTAGCGAAGGTGTTTTGGAACCTGAAGAGCTATCCAGTATGATGGAAAGCAAC
CATAAGAGTGAGAGGAAGGGTTTGCCGACTATTCAAGAGGATGTTAATAGATCTACGGAATCCATTTCTACATTTCAGAGCGACTG
CACTGTGGAAAACAGTCAGGAGTTTGTTCTGTTTGAAGATGTTAGAGCGTCTATTCAAAGGTCTGCTAAGGCGTCTGATGCTCTTA
CACCTGGAAATGATAAAGATCTGGTATCAATAGAAGTAGCAACCAGTCCACTCCAAGTACAGTGGACGTCCTTGCCTCTCAGAGAA
GATGAAACCAAAGCAGTCCTAAAAGCTGAGTATTAGAGCAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_190902 nuclear transcription factor Y subunit B-10 [Arabidopsis thaliana] | 759 | 6e-078 |
| XP_002877913 hypothetical protein ARALYDRAFT_906721 [Arabidopsis lyrata subsp. lyrata] | 749 | 9e-077 |
| CAB67641 transcription factor NF-Y, CCAAT-binding-like protein [Arabidopsis thaliana] | 724 | 7e-074 |
| XP_002879649 hypothetical protein ARALYDRAFT_902841 [Arabidopsis lyrata subsp. lyrata] | 700 | 4e-071 |
| BAJ34169 unnamed protein product [Thellungiella halophila] | 688 | 1e-069 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q67XJ2 Nuclear transcription factor Y subunit B-10 | 759 | 2e-079 |
| Q8VYK4 Nuclear transcription factor Y subunit B-8 | 675 | 1e-069 |
| P25209 Nuclear transcription factor Y subunit B | 542 | 4e-054 |
| Q60EQ4 Nuclear transcription factor Y subunit B-3 | 540 | 6e-054 |
| Q5QMG3 Nuclear transcription factor Y subunit B-2 | 507 | 4e-050 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LFI5 At3g53320 | 648 | 3e-065 |
| B9SGR7 Ccaat-binding transcription factor subunit A, putative | 629 | 5e-063 |
| B9IIZ5 Predicted protein | 622 | 3e-062 |
| D6MJZ5 Transcription factor (Fragment) | 576 | 7e-057 |
| Q2XTB9 Transcription factor NF-Y CCAAT-binding-like protein-like | 576 | 7e-057 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G53340.1 NF-YB10 (NUCLEAR FACTOR Y, SUBUNIT B10); transcription factor | 760 | 2e-080 |
| AT2G37060.1 NF-YB8 (NUCLEAR FACTOR Y, SUBUNIT B8); transcription factor | 675 | 1e-070 |
| AT2G37060.2 NF-YB8 (NUCLEAR FACTOR Y, SUBUNIT B8); transcription factor | 675 | 1e-070 |
| AT2G37060.3 NF-YB8 (NUCLEAR FACTOR Y, SUBUNIT B8); transcription factor | 675 | 1e-070 |
| AT3G53320.1 unknown protein | 648 | 2e-067 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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