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Information for unigene UN16068

FASTA Sequence
Unigene ID: UN16068Length: 1057  SNP
GGGCTCTCTGCCCAACATTCTCTCCCCCAATCTCGCTGTTACGCACTGTGTATCCATCCAACAACAACCAGCAAAGCTTTTGATCT
GATCTGATAAGATGGCGAGCATCAGCAACGAGCCGGAGCGTGAGCACAGAGACGAAGAAGAGTCCGGAGCCAACGAGGACGAAGAC
ACCGGTGCTCAGGTCGCTCCCATCATCAAACTCGAAGAAGTCGCCGTCACTACCGGTGAAGAAAACGAAGATACCATCCTCGATCT
GAAATCGAAGCTGTATAGGTTCGATAAAGATGGGAGTCAGTGGAAGGAGAGAGGTGCTGGGACTGTCAAGTTCCTTGAAGCATAAG
GAGACTGGGAAGATTCGTCTCGTTATGAGGCAATCCAAAACTCTCAAGATCTGTGCTAATCATCTCGTTACATCGGGGATGAGTGT
TCAGGAACACGCTGGGAATGACAAGTCTTGTGTGTGGCACGCTCGTGATTTCTCCGATGGGGAGTTGAAGGATGAGCTTTTCTGTA
TCCGCTTTGCCAATGTTGAGAACTGCAAAGCATTCATGCAAAAGTTCAAGGAAGTTGCTGAATCTGAAGAAGAGAAAGAGGAGAGT
AAAGACGCTTCTGAGGCTGCTGGTCTTCTTGAGAAGTTAACAGTGGAAGAGAAGCACACGGAGGAGGAGGAGAAGAAGGAAGAGAA
ACCAGTGGAGAAGGCAGAGAAAGCTGTTGAAGAAAAGAAAACCGAGGAGACCGTGCCCTCAGCGTAAGATGCATATGCCTTGTACA
ACAAACACACAAGGCTACTTAATTTACAGCCTCATATGTTTTAAATCCATCAGAGACTTGGCTTTCTTTTCTTTCTTTCTTGAAGT
TGATACATGTTTTGTCAGTGTCATCATGTTTACTTGCTGAGTCTATATGAGATTCTGGGGTTGTTTTTGGGATTCGTTTTGTGGAA
AGAATATCCCTTTGTTTTGATTTTACAAAATGTATGCATTGGTGTGTTTTTTTTTTCATTGAACAAGTCGTGTTACATTACACTAT
CGTATTGCTGTTCTACAAAAACCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002879247 hypothetical protein ARALYDRAFT_901981 [Arabidopsis lyrata subsp. lyrata]5972e-059
NP_180567 Ran-binding protein 1-b [Arabidopsis thaliana]5962e-059
AAM13098 Ran binding protein [Arabidopsis thaliana]5962e-059
CAA66046 atranbp1b [Arabidopsis thaliana]5891e-058
NP_172194 Ran-binding protein 1-a [Arabidopsis thaliana]5496e-054

Swiss-Prot top hits (Blast detail)Scoree value
Q8RWG8 Ran-binding protein 1 homolog b5969e-061
Q9LMK7 Ran-binding protein 1 homolog a5493e-055
P92985 Ran-binding protein 1 homolog c5027e-050
Q3T0M7 Ran-specific GTPase-activating protein2421e-019
Q09717 Ran-specific GTPase-activating protein 12195e-017

TrEMBL top hits (Blast detail)Scoree value
Q2V602 Putative uncharacterized protein5432e-053
Q1WWI2 At5g585905021e-048
A9P8P1 Predicted protein4983e-048
B9HND6 Predicted protein4912e-047
B9RSC5 Ran binding protein, putative4733e-045

Arabidopsis top hits (Blast detail)Scoree value
AT2G30060.1 Ran-binding protein 1b (RanBP1b)6003e-062
AT1G07140.1 SIRANBP; Ran GTPase binding5492e-056
AT5G58590.1 RANBP1 (RAN BINDING PROTEIN 1); protein binding5026e-051

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  50%
 
82  33%
 
71  17%

Unigene MembersMember information