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Information for unigene UN16076

FASTA Sequence
Unigene ID: UN16076Length: 760  SNP
GGAAACTTAAAACATTCTCAATGACTTTTCCTTCTCCTTTTCTTTTTTCTACACGTCTCTATGGCTCCTATAACTTCTCTAGGTCT
CTGGACGAAGGATTTGCACTGTTAGTCATCTCCTTTCGTCGTCTCTCTAGCTACACGTTTCACAGGAGATCAGAAACAACAATGAG
TCAATACAATCAACATCCCGTTGGTGTTCCTCCTCCTCAAGGTTATCCGCCTGAGGGGTATCCACCGCAAGGATATCCTCCTCAGG
GATATCCGCCTCAAGGCTACCCACAGCAGGGCTATCCACCACCGCAGGGTTATCCTCAGCAATCTCCTCCTTATGCACCGCAATAT
CCACAGCAGCATCAGCAGCAACAACAGAGCAAGCCTGGGTGTCTAGACGGATGTCTTGCTGTTCTCTGCTGTTGTTGTCTCTGTGA
TTTATGCATCTTCTGATTGGAGTACCTGCTCGGAGCTGCTTTTTAATTGCAAGAGAGTGTTTGGCGACACAAGATCATTTGTTGCG
TAATGGGCATTAAAATGAATTGCTGGATACAATCTCTTGTATATCCTCTGTCGTATTATCTTTTATGTTTTTCGATTCATAAATAA
CATATTGTCTATCGACTTTCTGGCTTGGTTTGGATTTGAGACTAGCGGGAATGTAAATTGGTGTGGTTGTGGAGACACTATTCCTT
TTATTTACTTTCGTATGTCATTGGATTTTTTTAATACATATTGATATCTTCATCAATTGAAAAGTAGATTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_181673 proline-rich uncharacterized protein [Arabidopsis thaliana]4104e-038
XP_002881775 expressed protein [Arabidopsis lyrata subsp. lyrata]4096e-038
XP_002267098 PREDICTED: hypothetical protein [Vitis vinifera]3316e-029
AAT48011 rhodopsin [Megalocranchia fisheri]2393e-018
AAT48003 rhodopsin [Onychoteuthis sp. B3-JMS-2004]2341e-017

Swiss-Prot top hits (Blast detail)Scoree value
Q8S8M0 UPF0467 protein At2g414204102e-039
A5PLE2 UPF0467 protein C5orf32 homolog2542e-021
P31356 Rhodopsin2166e-017
P24603 Rhodopsin2131e-016
Q17094 Rhodopsin (Fragment)2131e-016

TrEMBL top hits (Blast detail)Scoree value
Q0D316 Rhodopsin (Fragment)2392e-018
Q0D324 Rhodopsin (Fragment)2348e-018
Q3BDP4 Rhodopsin (Fragment)2312e-017
Q0D313 Rhodopsin (Fragment)2302e-017
Q0D319 Rhodopsin (Fragment)2258e-017

Arabidopsis top hits (Blast detail)Scoree value
AT2G41420.1 proline-rich family protein4102e-040
AT3G49845.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: XYPPX repeat (InterPro:IPR006031); Has 14038 Blast hits to 7746 proteins in 541 species: Archae - 8; Bacteria - 1083; Metazoa - 5225; Fungi - 1793; Plants - 3748; Viruses - 424; Other Eukaryotes - 1757 (source: NCBI BLink).2623e-023
AT5G67600.1 unknown protein2131e-017
AT5G17650.1 glycine/proline-rich protein1621e-011
AT1G12810.1 proline-rich family protein1602e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  12%
 
93  18%
 
63  18%
 
73  18%
 
116  35%

Unigene MembersMember information