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Information for unigene UN16077
| FASTA Sequence |
| Unigene ID: UN16077 | Length: 857 |
SSR | | GGGTTTCACTGCGCTGTTCTAAAAGGGTTTCGTTTGAAGAAGATAAGAGGTTGCAGAAGAAGAAGAAGATGCCAGGCCCTGTTGTT
GAAGAAGTTAAGATTGAGGAATCCATCAAAGAGCAAATGAGGCTCGAGAAGGAAGATGATGTTGTCGTTGAGGATGTCAAAGACGG
AGATGAAGACGACGATGTGGATGACGATGACGATGACAACGTCGATGGAGCTGGTGACAATGAGAGCTCTAAACAAAGCAGAAGCG
AGAAGAAAAGCCGCAAAGCTATGCTGAAACTTGGAATGAAACCTGTCACCGATGTTAGCAGAGTGACTATCAAAAGATCAAAGAAT
GTTTTGTTTGTCATCTCGAAGCCGGATGTGTTCAAGAGTCCCAACTCTGAGACCTATGTGATATTCGGTGAGGCCAAGATTGATGA
TATGAGCTCTCAGCTACAAGCTCAAGCTGCTCAGAGGTTCAAGATGCCGGACGTTGCTTCTATGATCCCTAACGCCGATGCCTCTG
AAGCAGCCGCGGTTGCTGCACAAGAGGAGGACGAAGATGATGATGATGTTGATGAGACCGGTGTTGAAGCCAAGGATGTTGAGCTC
GTGATGACTCAGGCTGGTGTTTCCAAGGCCAAAGCCACTAAGGCTCTTAAAGCCAATGATGGAGATATCGTTTCCGCCATCATGGA
ACTCACTACGTAGGTTGAGTTGCAGAGTCACGCAATTGTCCTCTTTTCTTAATGAATGTCTCGTTTCTCGAACATTGTTTGTGTTT
CGCCACTTTAGAGGCTATTTTTTTTTTTCTATAAACCATAAGCAAACTTGATTCCAAATTTATAGCATGAGACGTTCATTTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002874632 hypothetical protein ARALYDRAFT_489891 [Arabidopsis lyrata subsp. lyrata] | 881 | 1e-092 |
| NP_192786 Nascent polypeptide-associated complex subunit alpha-like protein 4 [Arabidopsis thaliana] | 870 | 2e-091 |
| NP_001078369 Nascent polypeptide-associated complex subunit alpha-like protein 4 [Arabidopsis thaliana] | 861 | 3e-090 |
| AAD03429 similar to nascent polypeptide associated complex alpha chain [Arabidopsis thaliana] | 820 | 2e-085 |
| NP_564415 Nascent polypeptide-associated complex subunit alpha-like protein 5 [Arabidopsis thaliana] | 806 | 7e-084 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SZY1 Nascent polypeptide-associated complex subunit alpha-like protein 4 | 870 | 1e-092 |
| Q8LGC6 Nascent polypeptide-associated complex subunit alpha-like protein 5 | 806 | 3e-085 |
| Q94JX9 Nascent polypeptide-associated complex subunit alpha-like protein 2 | 642 | 3e-066 |
| Q6ICZ8 Nascent polypeptide-associated complex subunit alpha-like protein 3 | 612 | 9e-063 |
| Q9LHG9 Nascent polypeptide-associated complex subunit alpha-like protein 1 | 585 | 1e-059 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WWN5 Putative alpha NAC | 870 | 2e-091 |
| A8MQP6 Uncharacterized protein At4g10480.2 | 861 | 2e-090 |
| B9IDG2 Predicted protein | 683 | 8e-070 |
| A9PB21 Putative uncharacterized protein | 673 | 1e-068 |
| B9S5M4 Nascent polypeptide associated complex alpha subunit, putative | 668 | 5e-068 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G10480.1 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | 881 | 5e-095 |
| AT4G10480.2 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | 872 | 6e-094 |
| AT1G33040.1 NACA5 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 5) | 817 | 1e-087 |
| AT3G49470.1 NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2) | 653 | 1e-068 |
| AT5G13850.1 NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3) | 618 | 2e-064 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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