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Information for unigene UN16090
| FASTA Sequence |
| Unigene ID: UN16090 | Length: 1258 |
SSR | | AGGGGAGATTCACAATGTTGAGACTGCTTTAGCTAATGAGCGAGAAGATCATGTTGTCGAGATAAAGAAATTGAATTCGTTGCTCA
ATAAAAAGGATACTATCATTGAAGAGATGAAGAAAGAGCTTCAAGAAAGACCATCAGCAAAATTAGTTGATGATCTGCGCAAGAAA
GTGAAAATTCTGCAGGCTGTAGGTTACAATTCAATTGAGGCCGAGGACTGGGATGCTGCTACCACTGGTGAAGAGATGAGCAGAAT
GGAGTCGCTTCTTCTTGATAAAAACAGAAAAATGGAGCATGAGGTCACTCAGTTAAAGGTTCAACTTTCTGAGAAAACCTCCTTGC
TTGAGAAGGCTGAAGCCAAGGGTGAAGAACTAACAGCTAAGGTTAATGAACAGCAAAGACTGATTCAAAAGTTGGAGGATGATATC
TTGAAGGGTTACAGTTCAAAAGAGCGAAAAGGTGCTCTATTTAATGAGTGGGAGTTCTCAGAAGCAGGTGTGGCTGAGCAGTCTGA
GGCTCCTATGGATCAGAAACATGTTCCAACAGATCAAGATCAAAGCTCAATGCTGAAAGTTATCTGCAGCCAAAGAGATAGGTTCC
GAGCACGGTTGCGGGAAACAGAAGAGGAAATAAGACGATTAAAAGAGAAGATAGGCTTTCTCACAGACGAATTGGAGAAGACTAAA
GCAGACAACGTGAAACTCTATGGCAAAATCCGTTATGTACAAGACTATAACCATGACAAAGTTGTTTCCCGAGGATCAAAGAAGTA
CGTGGAAGATCTGGAAAGTGGATTTAGCTCGGATGTGGAATCTAAATACAAGAAAATATACGAGGATGATATCAACCCATTTGCAG
CATTCTCCAAAAAGGAAAGAGAGCAACGGGTCAAAGATTTGGGAATTAGAGATCGGATTACACTAAGCAGCGGCCGTTTCCTTTTA
GGAAACAAATATGCGAGGACATTTGCCTTCTTCTACACTATAGGATTGCATGTACTGGTCTTCACTTGTCTCTACCGCATGTCTGC
TTTCAGCTATTTCAGCCATGGAGCTGAGGAGACTCCGGTGACCGAAACAACCACAAACCTCCCTCGCGGTTTTTAATGATTTTCAT
CCTTTAAAACTTTTGCCCCTTGTTTATTTTATTCTCTGGGAAATTTTTTAAGCAGTGGGATTATAAAAGCTTGTGTACAGGGGATC
CAAATCACTAGATATATATATATACATATATAAAAGCCACAGAGAAGTTTTACT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566611 protein CASP [Arabidopsis thaliana] | 1767 | 4e-195 |
| XP_002883133 hypothetical protein ARALYDRAFT_318610 [Arabidopsis lyrata subsp. lyrata] | 1641 | 2e-180 |
| BAB01114 CASP protein-like; CCAAT displacement protein-like [Arabidopsis thaliana] | 1631 | 3e-179 |
| XP_002511964 Protein CASP, putative [Ricinus communis] | 1482 | 5e-162 |
| XP_002275327 PREDICTED: hypothetical protein [Vitis vinifera] | 1463 | 8e-160 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RE25 Protein CASP, putative | 1482 | 3e-162 |
| C5WN44 Putative uncharacterized protein Sb01g010430 | 1314 | 1e-142 |
| Q10E21 Expressed protein | 1298 | 7e-141 |
| Q53RI9 CASP C terminal, putative | 1294 | 2e-140 |
| Q0DP72 Os03g0710900 protein | 1163 | 3e-125 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G18480.1 AtCASP (Arabidopsis thaliana CCAAT-displacement protein alternatively spliced product) | 1768 | 1e-197 |
| AT1G64330.1 myosin heavy chain-related | 118 | 3e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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