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Information for unigene UN16091
| FASTA Sequence |
| Unigene ID: UN16091 | Length: 1299 |
| SNP | AAAAAAGTGAGGATAATCACTAATCAGTGAAAATTTATTTGAAATCTGCATGAAAAAGGGAAACATGTGACAATGTTTGAAAATAT
TATAGCAGATGAAACAAATCGTTCTCAATACGCAAACGTTCTCTCTTTTATTCCTTCAACTCTCACAAACCCACCAGATTAGACAC
TTATGACTAAGTCGTCGAATGTGTTCTTAAGCGCCGAGTCTTGTTTTGAGCTCTTCCGCAACTGCATCGATGAACTCCTCCGTGTT
GAGGTAAGTATCCCTCGAGAGCTTTGAGCCGTGAATGATGAGCGCAAGATCTTTGGTCATTTTTCCAGACTCCACTGTACCAACAC
AAGCAGCTTCGAGCTTCTCAGTAAACTCCAAGAGTTTTGAGTTGTCATCCAGCTTAGCTCTGTGTGCAAGTCCACGAGTCCAGGCA
AAGATGGAGGCTATGCTGTTTGTGCTGGTCTCGCCACCTTTCTGGTGAACCCTGTAGTGACGGGTAACGGTACCATGGGCTGCTTC
AGCTTCAATTGTCTTACCATCCGGGCAGACCAGAACAGATGTCATCAATCCAAGTGACCCGAATCCTTGTGCAAGGAAATCGCTCT
GGACATCACCATCATAGTTTTTGCATGCCCACACATAGCCTCCCTCGCTCTTAAGAGCGTAAGCCACCATATCATCAATGAGACGG
TGCTCATACCATATTCCAGCAGCTTCATACTTTGACTTCCAGCTGGCTTCATACACTTCCTGGAAGATGTCTTTGAATCTGCCATC
GTATTTCTTAAGAATGGTGTTCTTTGTGCTAAGATAAAGTGGCCACTTTTTCTCATAAGCAGTGTTCATCGATGCGTCCGCAAAAG
CACGGATGGACTCATCAGTGTTGTACATGGCCATAGCAACACCACCTTCACCGGTAAATGTAAACACTTCAGTTTCAGTTTTTCCA
TCTTTTCCCTCGAAGGTCATAGTCAGTCTTCCAGGTCCCTTGATAACAGCATCAGTGGCACGGTACTGATCACCAAAAGCATGCCT
TCCAATGCAGATGGTGGCACACTTGATCGCCACATTATACTTCTTAGTGGCTTCAGCACTTTCAATAGTAACTTTGTCATCGGCAG
CATCACGGTGAGGAAGACCAAGGTCGAAGTACTTGATATCCAACTCCACAAAAGGAGTGATAAGCTTGTCCTTGATGGACTTCCAG
ATAACTCGGGTCATTTCATCACCATCCATCTCGACGATGGGATTTGCAACCTTGATCTTCTCAAACGCCATTGTTTTTTTTTTCGT
TAGAAAGAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_176768 isocitrate dehydrogenase [Arabidopsis thaliana] | 1439 | 5e-157 |
| AAM13090 similar to NADP-specific isocitrate dehydrogenase [Arabidopsis thaliana] | 1436 | 1e-156 |
| AAM65674 isocitrate dehydrogenase, putative [Arabidopsis thaliana] | 1429 | 7e-156 |
| CAD24782 isocitrate dehydrogenase [Arabidopsis thaliana] | 1425 | 2e-155 |
| BAG84436 NADP-dependent isocitrate dehydrogenase [Passiflora edulis] | 1357 | 2e-147 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q40345 Isocitrate dehydrogenase [NADP], chloroplastic (Fragment) | 1311 | 1e-143 |
| Q06197 Isocitrate dehydrogenase [NADP] | 1309 | 3e-143 |
| P50218 Isocitrate dehydrogenase [NADP] | 1305 | 7e-143 |
| P50217 Isocitrate dehydrogenase [NADP] | 1294 | 1e-141 |
| Q9Z2K9 Isocitrate dehydrogenase [NADP] cytoplasmic | 998 | 3e-107 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SRZ6 At1g65930/F12P19_10 | 1439 | 3e-157 |
| Q8RWH2 Similar to NADP-specific isocitrate dehydrogenase | 1436 | 8e-157 |
| Q8L9Z4 Isocitrate dehydrogenase, putative | 1429 | 5e-156 |
| Q8RYD5 Isocitrate dehydrogenase | 1425 | 1e-155 |
| B6VQB0 NADP-dependent isocitrate dehydrogenase | 1357 | 1e-147 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G65930.1 isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative | 1440 | 1e-159 |
| AT1G54340.1 ICDH (ISOCITRATE DEHYDROGENASE); isocitrate dehydrogenase (NADP+)/ oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1257 | 2e-138 |
| AT5G14590.1 isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative | 1152 | 4e-126 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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