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Information for unigene UN16097
| FASTA Sequence |
| Unigene ID: UN16097 | Length: 1330 |
SSR | | GCATTCAAGTCGTCTACGAGATTCTCCTCAGGTTCGTGGCTTCTCCCATGACTGACGCTAAGCTCGCAAAGAGATACATAGACCAC
TCCTTCGTCTTGAAGCTCTTGGACTTGTTTGATTCCGAAGATCAAAGAGAGAGGGAGTATCTAAAAACAATTCTGCACCGTGTCCA
CGGGAAGTTCATGGTGCATAGGCCTTACATCAGAAAGGCTATAAACAACATCTTCTACAGGTTCATCTCCGAGACTGAGAAGCATA
ACGGCATTGCAGAGTTGCTAGAGATTCTCGGGAGTATAATCAATGGTTTTGCTTTGCCTTTAAAAGAAGAGCACAAGCTTTTCCTT
GTCCGTGCTTTGATCCCTCTCCACAAGCCTAAATGCGCGTCGGTCTATCACCAGCAGCTTTCTTATTGCATAGTTCAGTTCGTAGA
GAAAGACTTTAAGCTCGCTGATTGCATCATCAGAGGCCTTTTAAAGTATTGGCCTGTTACCAACAGCTCCAAGGAAGTGATGTTTC
TTGGTGAGTTGGAAGAAGTCTTGGAAGCTACTCAAGCTGCTGAGTTTCAACGCTGTATGGGGCCTTTGTTCCGACAGATCGCTCGT
TGTCTCAACAGTTCGCATTTCCAGGTTGCTGAGAGAGCATTGTTTCTATGGAACAACGATCATATAAGAAACCTGATTACTCAGAA
CTACAAAGTGATCTTGCCTATAGTCTTCCCAGCTCTTGAGAGGAACACTCGTGGACATTGGAACCAAGCGGTTAAGACTCTGACTC
TAAACGTGAGGAAAGTGTTCTCGGACATAGACCAAACTCTCTTTGATGAGTGTTTAGCCAAATACCAAGTGGAAGAAGAGAATAAG
ACAGAGGTTAAAGCAAACCGGGAAAAAACATGGAAGAGGTTAGAAGATTTGGCGGCTTCAAAGACCAACGAGGCAGAGCTGGTCCC
AAGATTTGTGTCCTCAGTGAATCTTGCAAGCAGCTCTGAGTCCTAAGGGTAGGTACGGTGGTTTCTTCTCTGTTATGTCAGCTTAT
ACTTTTAATGGTAACGGATACAGATTCGGGTTTGAGTTGTTGAATCGGTTTTCTTGAGGCAACCAAGAAGATATTCGAAAGAGAGA
GAGAGAGAGAGAGGGAGGGTGAGTATATCAGTTCTCATCACTGAATACTTGACAACTTTTTTTTGTATGGGTTCTACTTGTTGGTT
GCTTGTGATCTTCTTCTTCTGGGAATGGGCAAAACAGCATATATGTACTACTGTAAGAAAACTATAGGGGATGGGTTCCTGAAAGA
CGAATGTATAATTATTTGGTTTAATTTAATCTTTTGGATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002885457 protein phosphatase 2A B [Arabidopsis lyrata subsp. lyrata] | 1576 | 7e-173 |
| BAB02360 protein phosphatase 2A B' regulatory subunit [Arabidopsis thaliana] | 1553 | 3e-170 |
| NP_188802 protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] | 1553 | 3e-170 |
| CAB10320 phosphatase like protein [Arabidopsis thaliana] | 1498 | 7e-164 |
| NP_567464 protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] | 1498 | 7e-164 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LVE2 Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' zeta isoform | 1553 | 1e-171 |
| Q8RW96 Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform | 1498 | 3e-165 |
| Q9LU89 Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform | 1285 | 2e-140 |
| Q8LF36 Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform | 1262 | 7e-138 |
| O04376 Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform | 1211 | 6e-132 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WNY8 Phosphatase like protein | 1498 | 5e-164 |
| B9SH46 Protein phosphatase 2a, regulatory subunit, putative | 1450 | 2e-158 |
| A5AQF8 Putative uncharacterized protein | 1433 | 2e-156 |
| B9IAI9 Predicted protein (Fragment) | 1433 | 2e-156 |
| A9PGQ5 Putative uncharacterized protein | 1399 | 2e-152 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G21650.1 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 1553 | 1e-172 |
| AT4G15415.2 ATB' GAMMA; poly(U) binding / protein phosphatase type 2A regulator | 1498 | 3e-166 |
| AT4G15415.1 ATB' GAMMA; poly(U) binding / protein phosphatase type 2A regulator | 1498 | 3e-166 |
| AT3G26020.1 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 1285 | 1e-141 |
| AT3G26020.2 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 1285 | 1e-141 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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