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Information for unigene UN16100
| FASTA Sequence |
| Unigene ID: UN16100 | Length: 1124 |
| SNP | GGACACACGAAACCGAAGGAGATAAGAGCGGCAAAACCACGGAGTCGTCGTGACTCGGTGACATAAATCGTTTTGAAAAAATGGTA
GTTGCGGCTGCATCCACTCCGTTTTCATTCTCGTCCGCCGTTTTCACGCGCCGTCGCAGCTTCAGACGTGTTTCAGTACCTCGAGT
AAGCGCCACTCTTTCTCGGGAGCCCTCTCCTCTTCTCCGAGCTGCTCACCACACCGTGGATAGTTACGTGAAGAGTGGGATGGTTA
TTGGTTTAGGATCTGGAGACGCTTCGGACTTGGCTATACGTTATTTGGGTCATCAACTTCGTTCTGGTTCTATACAAAATGTTGTT
GGTGTACCAATGTCTGCTCGAAGTGCGAGCGAAGCAGCAAAGTTTGGAGTCCCCTTGAAACATTTCCGGGATGATTTTCAGATTGA
TTTTGCATTCCATGACGCTGATGCTGTAGAAGAGGGTACGCTTATCTCAGTTATCGGGAGACCAAGAACAACACAGGAAGATGACT
ATATTCTGCGACAAAAGTCTATTGTGAAAGCAGCTGTTGAGGCAGTCTTCATGATAAAGGATGAGCAATACAAGTCTGGCCTTGAA
GGATCTATCCCTGTCTTAGTTCAATCTTTAAATTGGTTAGCTACAGCTGAGGAGATAGATGACTTGTACTTAGGAGACGCTGAGGT
GTGGAGAAGAGCTTCTGTAGGAGATGCAGGCCCTCTTGGAGGAGACTTTCCTATAGTCACCAGTGATGGTCACAACATTCTTGATG
TTGTCTTCACAACTCCTATTACAAACCTCGCTAACGTGGCTAAAAGCCTGGATACGATTGATGGGGTTGTGGACCATGGAATTGTT
ATGAAAAACAGATGCAGGGTGGTGATCGCCGGAGAGACAGAAGTAAGAACTGTTAGTTTGCAGACAAGTGCAGTGGAAGGTGGTGT
ATGAAATTATGGGGGAGACTTTGCAGAAGTTGTTGATTCCATAAGACAGTGAGAGGTTGGACTAAAACTGCTGTTAGGATTGCCAT
TCAAACCCATGAGGGAACTGTTCTACACATAGTACCCTAAGTTATAGAGCAATAATGCAACTTTTATAACTATACTATTATAACAT
CAGTAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002863568 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1203 | 9e-130 |
| NP_199265 ribose 5-phosphate isomerase A [Arabidopsis thaliana] | 1135 | 7e-122 |
| XP_002270834 PREDICTED: hypothetical protein [Vitis vinifera] | 821 | 2e-085 |
| XP_002317071 predicted protein [Populus trichocarpa] | 789 | 1e-081 |
| ABK96323 unknown [Populus trichocarpa x Populus deltoides] | 787 | 2e-081 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZU38 Probable ribose-5-phosphate isomerase | 233 | 1e-018 |
| Q7VA25 Ribose-5-phosphate isomerase A | 230 | 3e-018 |
| Q8DJF2 Ribose-5-phosphate isomerase A | 215 | 1e-016 |
| Q318Q3 Ribose-5-phosphate isomerase A | 212 | 3e-016 |
| Q5SIR5 Ribose-5-phosphate isomerase A | 165 | 9e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FI13 Putative uncharacterized protein | 1135 | 5e-122 |
| B9I0V6 Predicted protein | 789 | 7e-082 |
| A9PIX0 Putative uncharacterized protein | 787 | 1e-081 |
| B9SV71 Ribose-5-phosphate isomerase, putative | 707 | 2e-072 |
| Q10CS9 Os03g0781400 protein | 696 | 4e-071 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G44520.1 ribose 5-phosphate isomerase-related | 1144 | 3e-125 |
| AT2G01290.1 ribose-5-phosphate isomerase | 241 | 1e-020 |
| AT1G71100.1 RSW10 (RADIAL SWELLING 10); ribose-5-phosphate isomerase | 202 | 4e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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