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Information for unigene UN16104
| FASTA Sequence |
| Unigene ID: UN16104 | Length: 1948 |
| SNP | GTGAACAGAGAGTCTTTCATCATTATCGAAAAACAGAGCTCGAGTACACAGTTCAATAAATATGACAAAACGGTTTCAATTATTCA
GCAAAAACAAGACAATCTTGCTCATAACATTGCCGGAACATGGGAAAAAAAAAGAAACAAACGGATGTAGTTCTCTGACTGTTGTG
CTTTTTATTCATCATCATTAACCAATGAGTAACTTATTCTCTTCCAAGAAGCTGTAGGTTGGCACCTCCAGGTTGTACGGTGCAGG
ACCTTTCCTAATCCTTCCAGAGATATCGTAGTGCGAACCATGACACGGGCAAAACCAACCACCGTAATCACCAGCATTCGGCAAAG
GGATACACCCCAAGTGAGTGCAGACTCCAACAACCACCAACCACTCCGGATTCTTGACCCTCACCGAGTCCTCCTGCGGGTCTCTC
AAAGATCCAAGATCCACGCTGTTCGCCAGCTTGATGTCATCTTCTGTTCTTCTCCTGATGAACACCGGCTTTCCACGCCACTTCAC
TGTCACAGTAGTTCCCGGCTCGATGCTCCCGAGGTCGACCTCGAGGGACGCAAGGGCGAGGACATCTTTACTCGCGGACATGCTGA
CAATGAGCTTGAGGACAAGAAGGCGGAGAACAGAGGCGTAGACAAACCTCCCACCGGACAGGACGAAATATGCGAATGCACGCTTG
CTAGGGTCACCAGGTGGGTAACGCTCGTGGTTGTGGTCATCATAGACAATCTTCGAGTTAGGCGTCTTGACGGCCTCGACGGTGGC
AGGCTCCGAACCAAAACCTACCTCATTTCCTTGAGTAAGGACTTGTGAAGAGAAACCTCTCATGAGGCTCCGGTGGTAAGAATCGA
AACGTGAAAGATCGGCAGAGGAGACAGATCTGGGGGATGAAGATGAGTCGTCGACGCCGCCATTGGATAAGGTATGGTCTCGGGAA
AGCGCGAAGGAGGAGACGGTGGAAGATCTCTGCGAAAGAGAAAAAAGCCTCCTTCCTGCTACTCGCAGCATCTCTCTGCTCAAACG
GTGGATTAGGGTTTCGCTTTGGCGAGAACAGAGTTTGTCCTAATGGTTAGAGGGACGGCCGATGGCAACAGAGATGTTGAATAGTC
CCGTAAATTTAGTCTTCTACTAAAGAAAAGGTCAATTTTTTTGTTTATCTGTTGTTATTATTATTCTTTTCCAGTGTGAACTTTGT
TTTTTATGTGGTTTTACAAATATAATTGTTGTACGTCTAAAATAAATTTTATTTTTAACAATAAGTAATAAATAATTATATCAACT
GACTATTTTATGAAATTTCATTTAGCAGTTTTGTACACATCATTAAATTGTTTCATAAAATTATTTAACAATTCTACTTATATTTT
GCACCATGATAATTTTTTAAAGTAATTTCCTCTCTATTAATTTTGATAATTAATAATAAATCATATTCAGATCCAAATTTATAAGC
GCATTATTAGACTTTTGATCAAAATACTAGACTAAAACAATTATCACAAGATAAAATGTGTTTAGACAGACATATACATCTCAGTG
TTCAAGAAAGCGCTAGGCGTTAAATGGACGGCGACCTAACACCTAGCATCTAGCGCCTAGAATGATTAAGTGGACGCCTAGATTAT
TAGTTAAATGGTCTAGGCGTTTATATATTATAGCAATATATTAAATATATGTAAGGTTTTATACTTAATAATAGTAAAAACTATTA
TTTATATATGATAAAAATTATTTTCATAAGAATATATATTATAATATATTAATTATTATAATTTATGAATAATAATATATATTATT
TATTATTACAATATTATAATTATTTAAACGGTTTAAAGAGTAATCGCCACGGTTCTTTAACACCTAACGCGTAAGCGCCGTTTAGA
ACACTGTATATATACACCACACCATATCCGTTTGAGAAATAACGATGAATTTTTAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAM63353 ubiquinol--cytochrome-c reductase-like protein [Arabidopsis thaliana] | 1322 | 3e-143 |
| NP_196848 Ubiquinol-cytochrome C reductase iron-sulfur subunit [Arabidopsis thaliana] | 1318 | 9e-143 |
| XP_002873613 hypothetical protein ARALYDRAFT_488163 [Arabidopsis lyrata subsp. lyrata] | 1309 | 1e-141 |
| NP_568288 Ubiquinol-cytochrome C reductase iron-sulfur subunit [Arabidopsis thaliana] | 1300 | 1e-140 |
| AAM62600 ubiquinol--cytochrome-c reductase-like protein [Arabidopsis thaliana] | 1299 | 1e-140 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P51132 Cytochrome b-c1 complex subunit Rieske-2, mitochondrial | 1030 | 9e-111 |
| P49729 Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) | 1017 | 3e-109 |
| P51133 Cytochrome b-c1 complex subunit Rieske-3, mitochondrial | 1008 | 3e-108 |
| P51135 Cytochrome b-c1 complex subunit Rieske-5, mitochondrial | 1001 | 2e-107 |
| P37841 Cytochrome b-c1 complex subunit Rieske, mitochondrial | 1000 | 3e-107 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LD84 Ubiquinol-cytochrome c reductase iron-sulfur subunit | 1322 | 2e-143 |
| Q9LYR2 Ubiquinol-cytochrome c reductase iron-sulfur subunit | 1318 | 6e-143 |
| Q94JS0 Ubiquinol-cytochrome c reductase iron-sulfur subunit | 1300 | 8e-141 |
| Q8LEK8 Ubiquinol-cytochrome c reductase iron-sulfur subunit | 1299 | 1e-140 |
| B9GMU2 Ubiquinol-cytochrome c reductase iron-sulfur subunit | 1064 | 2e-113 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G13440.1 ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative | 1324 | 7e-146 |
| AT5G13430.1 ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative | 1315 | 7e-145 |
| AT4G03280.1 PETC (PHOTOSYNTHETIC ELECTRON TRANSFER C); electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II | 133 | 8e-008 |
| AT4G03280.2 PETC (PHOTOSYNTHETIC ELECTRON TRANSFER C); electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II | 133 | 8e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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