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Information for unigene UN16108

FASTA Sequence
Unigene ID: UN16108Length: 1417 SSR 
AAAAGAACAAAAGATGTTTGGATCAATGAAGACAAATTCAAACTGAGGAAATATCAGGACAATGGAGATTAGTTTCACAGAGTAAA
CTAAACGGAACAAGTTTCTTTTGTCTTTAATCTTATTATTATAAAGCCAGACAGCACAAAGAAGTCGACACATTTATCTAGGCCCA
TCTTTAACAGCCACCTGTGATCGGTTCCATTTTAATAGCAGGGTGTGGCAAGCGTTGAAGAGCTGTAATGGTGGTTCTCAGCAGAT
CATCATCTCCAACAATCATCCGCAGCTTCTTCGAAAATCCCTCTCGAGATAGCTTCTTCTCCCTAAGTTGTTGGTAATAAGCAGTG
ATCAAGTCCATGGCTTTCGGAGCAATTTTGCTTGAGATTGCATTGAAGAGCAGAGGGTAAGGCATCAAACTAGAGCTGGGCTTCCT
AGTGCTGGAACCGGCACTGTTGTTTCCTCCGCTTCCTAGCCCCGGTTGGAGGGAGATCCTTTGGTTCCTTCCAAGGTGAGCCCTGA
AGTCTCATGCTTACTCTGAGTAGCAGAAAGTAAATTCCCTTCAGCATTGGGGATAGACAACAGCTTGAAGCTAACTACAAATTCTG
GACAAACATGAGTGTTCATATTCATGTTCCAGACAACATAATGCTTCGGACTCGACACATTATCTACTCCATTATCATACTCTTCT
CCACCAGTAAAGAACTGAGCTCTATCACCACCAAGTGGCTCCATATTCCCCATTATCACACGGCACAAAACCATGTGACGCACACC
GTTTTCATCAACATCACAATGTGTCGCACTGTTATAACAACATCTTTCACATTTGCTTAAACAGAAAAAAAAACTAAACAATAAAG
ATATGAGGGAGAAAGAAGAACCTGAAGTAAGGGCAGTTTGCAGCAGCCAAGTGAACACCAACACCATACTTTGACTTTTTGATCAA
CTCTCCACACACACCAAGTCCGTGCATCATCACTGCAGATAACAGTTCCTTCTTCGCAGGAAGCCAAGCGTATCTAACGTTGGCAT
CTCCTCGGCTCAGCTTAGTGACGTCGGCTTGTTTCTTGAAAAGAGATTGACGATCTCTGGCGACGTCACCTGAAAACTTATACGCA
TCGAGCAGCTCTACATGTCCTAGAGCGGCCATACCTAAAACAAACTTCTCTTTGACAGCGTCTACATCAAGTTCTTCCTCCTCAGC
AGGCTTGACACCAGAGAACATACTAGCTTCCGTCTCGTCCCGCCTCTGGACAGCATCATCATCATCATCAAGCTCAAGGCTGCAGC
TATCACTACTGTTCAACTTCAGCTTCGGTGATTTCCCACCGTTGATATCGATTTCGAGTGCAGCTTGATCTCACATTGACCATGAT
CTCTCTCTCTACAGTCTCTTCCCACGCTGTCAGGAAAAGCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_565806 RCD-one 1-like protein [Arabidopsis thaliana]5013e-048
AAL07215 unknown protein [Arabidopsis thaliana]4971e-047
AAN64166 unknown protein [Arabidopsis thaliana]4817e-046
XP_002881400 hypothetical protein ARALYDRAFT_482511 [Arabidopsis lyrata subsp. lyrata]4782e-045
CAC14428 ceo protein [Arabidopsis thaliana]4252e-039

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O82289 Expressed protein5012e-048
Q940B2 Putative uncharacterized protein At2g355104977e-048
Q8H0Z1 Putative uncharacterized protein At2g355104815e-046
Q8RY59 At1g32230/F3C3_14251e-039
Q9FT85 Ceo protein4251e-039

Arabidopsis top hits (Blast detail)Scoree value
AT2G35510.1 SRO1 (SIMILAR TO RCD ONE 1); NAD+ ADP-ribosyltransferase5011e-050
AT1G32230.1 RCD1 (RADICAL-INDUCED CELL DEATH1); protein binding4258e-042
AT1G32230.2 RCD1 (RADICAL-INDUCED CELL DEATH1); protein binding4231e-041
AT1G32230.3 RCD1 (RADICAL-INDUCED CELL DEATH1); protein binding4231e-041
AT1G23550.1 SRO2 (SIMILAR TO RCD ONE 2); NAD+ ADP-ribosyltransferase1873e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  17%
 
93  50%
 
71  17%
 
111  17%

Unigene MembersMember information