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Information for unigene UN16127

FASTA Sequence
Unigene ID: UN16127Length: 1008 SSR 
GGACTGTTATTGTCTGAAGAAGAACACAATCTTATCCGACAAAAGAGAGAGAGAGAGAGAGAGTGAAACAAGAATGGCGATTCTCT
GTTCGTCTTCGACAGTTATACAACTCCCTTCTTCTTCGGTGAAAACCTCCGGATGTGACAGAAGGTCTCCGTTTCTAGGATTCTCT
CTAAATGCTATCTCAAAGCCGCAGGTTCGAATCGCCACCAATGCGAACACAAAAAGAGGAGTGCAGGTGAAATGCGAAGCCGAGCA
GGCAACTACTATTACTACTACTACATCATCCCTTGTTCCGGCGAATCAACGGTGGATGTTCGACGAAGAAGAAGCAAATGGCCCTG
ATATCTGGAACACAACATGGTATCCAAAGGCTTCAGACCATGTGAACACGGACAAGCCCTGGTACGTGGTCGACGCAACCGACAAG
ATTCTCGGAAGGTTAGCATCAACCATTGCTAACCACATCCGTGGCAAGAACCTTGCCTCCTACACTCCCAGTGTCGACATGGGAGC
CTTTGTTATTGTGGTGAATGCTGAGAAAGTAGCTGTGTCTGGAAAGAAAAGGAACCAGAAGCTGTACAGGAGGCATTCAGGACGAC
CTGGTGGTATGACTGTAGAAACCTTTGATCAGTTGCAGCAGAGAATCCCGGAGAGGATCATTGAGCACGCTGTTCGTGGAATGCTT
CCCAAGGGACGGCTTGGGAGAGCTCTGTTCAATCACCTGAAGGTGTACAAAGGTCCAGAACATCCTCACGAGGCACAGAAGCCGCT
TGATCTGCCTATCAGGGACAAGAGAATACAGCTGTAGAAATAGATACATACACCATGGAGTATCTCTGTTAAGGTCTAGTTTTATA
TTGGGTTTCTGTAGTTTCTTTTTTCTCAAAGCTAGAGGAGACTTTGCAGATTCTTTATTCTATTGCTTGCAACTATCATCTCTATG
CTATAGAGTTTTTTAATGTGCATTTTCTTGCTGCTAACTATCTTAATGATAATTTGGCTACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002887748 EMB1473 [Arabidopsis lyrata subsp. lyrata]11203e-120
NP_177984 50S ribosomal protein L13 [Arabidopsis thaliana]11114e-119
XP_002532120 50S ribosomal protein L13, putative [Ricinus communis]8775e-092
ABK96526 unknown [Populus trichocarpa x Populus deltoides]8651e-090
XP_002316846 predicted protein [Populus trichocarpa]8328e-087

Swiss-Prot top hits (Blast detail)Scoree value
Q9SYL9 50S ribosomal protein L13, chloroplastic11112e-120
P12629 50S ribosomal protein L13, chloroplastic7992e-084
Q3MF94 50S ribosomal protein L134991e-049
Q8DMK8 50S ribosomal protein L134991e-049
Q8YPK6 50S ribosomal protein L134954e-049

TrEMBL top hits (Blast detail)Scoree value
B9T1K1 50S ribosomal protein L13, putative8773e-092
A9PJH3 Putative uncharacterized protein8658e-091
B9I1Q8 Predicted protein (Fragment)8326e-087
A2WV25 Putative uncharacterized protein7977e-083
Q94J17 Os01g0749200 protein7977e-083

Arabidopsis top hits (Blast detail)Scoree value
AT1G78630.1 emb1473 (embryo defective 1473); structural constituent of ribosome11309e-124
AT3G01790.1 ribosomal protein L13 family protein1998e-016
AT3G01790.2 ribosomal protein L13 family protein1998e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
66  86%
 
81  14%

Unigene MembersMember information