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Information for unigene UN16140

FASTA Sequence
Unigene ID: UN16140Length: 821 SSR 
GGGATCCTCCCTCTTTCCCATGGCCAAGCCATCCTCCTCTCCTCTCCCCAAATCCCAATAACAAAACTCTCCTCTCTCTCTCTCTA
TCTCTCTCTTTCTTCCAATCTTCTTCAGATTCGAAATGGCTGCTGCAATCGCTTCTCTCTCCTTTCCGGCGCTGGGCCAATCCGCA
AAGATTTCCAATTCAACCACGCCTTCTCTTCCTCTCGCCTCCGTCTCCGCCATCTCCAGGAGGATTTCTCGCCACTCTTTGACTTC
TTCTTCTTCTTCTAGGGCTTCGAAACTAATCATCCACTGCATGTCTAGTGTTACCGATGTGCCACCTGTATCGGAGACAAAGTCAA
ACTTCCTAAAAGCGTACAAGCGACCAATCCCCAGCATCTACAACACCGTCCTCCAGGAGCTCATCGTACAGCAGCATTTGATGAGG
TATAAAAAGACTTACCGTTACGACCCTGTTTTCGCCCTCGGCTTCGTCACTGTCTACGATCAGCTCATGGATGGCTATCCCAGCGA
TCAGGATCGTGATTCCATTTTTCAAGCCTACGTCCAAGCTTTGAATGAGGATCCTAACCAATACCGAGCTGATGCGCAGAAGATGG
AGGAATGGGCGCGAAGTCAGACTTCTGCTTCACTAGTTGACTTCTCGTCTAAGAGGGAGAAGTTGAAGCGATTCTTAAGGACATTT
CAGAAGAGCTGGCAGTAAGAAGTTTCAGTTACAGCAGTTCTTCGCTGTTGGCTTGTTCGCTTGCTGAGCTGCAGTGCTACTGATCC
ACGTCTTGACAGCTTTGTGCATCCTAATATCACAGAAAGCGTGATCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABV89647 chloroplast light-regulated protein [Brassica rapa]7815e-081
XP_002884230 hypothetical protein ARALYDRAFT_900469 [Arabidopsis lyrata subsp. lyrata]7304e-075
AAM64943 unknown [Arabidopsis thaliana]6982e-071
NP_565491 protein THYLAKOID FORMATION 1 [Arabidopsis thaliana]6982e-071
XP_002275686 PREDICTED: hypothetical protein [Vitis vinifera]6094e-061

Swiss-Prot top hits (Blast detail)Scoree value
Q9SKT0 Protein THYLAKOID FORMATION 1, chloroplastic7023e-073
Q7XAB8 Protein THYLAKOID FORMATION1, chloroplastic5482e-055
Q84PB7 Protein THYLAKOID FORMATION1, chloroplastic5268e-053
B0C3M8 Protein thf12581e-021
Q116P5 Protein thf12534e-021

TrEMBL top hits (Blast detail)Scoree value
A8IXS3 Chloroplast light-regulated protein7813e-081
B9I6H1 Predicted protein5994e-060
C6T9W9 Putative uncharacterized protein5852e-058
A7XZB8 Chloroplast-localized protein5781e-057
B7FIT6 Putative uncharacterized protein5734e-057

Arabidopsis top hits (Blast detail)Scoree value
AT2G20890.1 PSB297023e-074

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  25%
 
102  50%
 
81  25%

Unigene MembersMember information