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Information for unigene UN16149
| FASTA Sequence |
| Unigene ID: UN16149 | Length: 804 |
SSR | SNP | GGGGATATTATTATTATACTTTGTACACTTGGGATTAGGAGGGTCGCTCCTGCTTCTCTCTCTCTCTCTTAGCCATGGCTGCTGCT
TTCACCTGCACCTCTCTTCCTCCGCTTTCTCTCCGTTGTTCAGAGACGAGAATCGCATCACCCCCATCGGCTTCACTCTCAGCTCG
TCGGCTCTTCGCGGTGTCACCAGAATCAGAAGGATTGAGAATCCGTCTTTCTCAGTCGTTGACCTCGATTCAACCTAGGGTTCCTC
GATTACGAAGAGGCGTCGTCGTCTGCGAAGCTCAGGAAACTACTACCGACATAGTTTCAATAGTCAACGACTCGACGTGGGATTCT
CTAGTTCTCAAGGCAGACGGGCTTGTGCTTGTCGACTTCTGGGCACCATGGTGTGGACCTTGCAAAATGATTGACCCTCTTGTGAA
TGAGGTAGCGCAACAGTACACCGGGAAGGTCAAGTTCTACAAACTAAACACCGACGATTCTCCTTCAACCCCGAGCGAGTACAAAG
TTAGAAACATCCCAACGATCGTGATCTTTGTCAACGGCGAGAAGAAGGACGCTCTCATAGGTACAGTGCCCAAATCCGCACTCACA
TCTAGCATTGACAAGTTCTTGCAATGAGATTGTGAGTCTGTATTGATCACTCTCTCTCCCCCTCTGTTTCGTATTCTCATTCTCTC
TGTAACTTGCGCTTTCTCTATAGCTATCTGCTTCCGCTGTATCTTTTCTTCATCACTGAACATCTAGACATGGATCAATAATACTA
TAATATAATATCTCATGTTTTTTTTGTTGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002872770 hypothetical protein ARALYDRAFT_490216 [Arabidopsis lyrata subsp. lyrata] | 714 | 3e-073 |
| NP_192261 thioredoxin M2 [Arabidopsis thaliana] | 684 | 8e-070 |
| AAF15949 thioredoxin m2 [Arabidopsis thaliana] | 678 | 4e-069 |
| AAM67285 putative M-type thioredoxin [Arabidopsis thaliana] | 675 | 9e-069 |
| XP_002892174 hypothetical protein ARALYDRAFT_470338 [Arabidopsis lyrata subsp. lyrata] | 635 | 4e-064 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SEU8 Thioredoxin M2, chloroplastic | 684 | 4e-071 |
| O48737 Thioredoxin M1, chloroplastic | 615 | 4e-063 |
| Q9XGS0 Thioredoxin M-type, chloroplastic | 590 | 3e-060 |
| P07591 Thioredoxin M-type, chloroplastic | 385 | 2e-036 |
| Q7X8R5 Thioredoxin M2, chloroplastic | 383 | 3e-036 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A7LNX7 Thioredoxin | 443 | 5e-042 |
| B9S2L1 Thioredoxin m(Mitochondrial)-type, putative | 439 | 1e-041 |
| A9PIT9 Putative uncharacterized protein | 438 | 2e-041 |
| A9SR27 Predicted protein | 431 | 1e-040 |
| A9TTU3 Predicted protein | 427 | 4e-040 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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