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Information for unigene UN16156
| FASTA Sequence |
| Unigene ID: UN16156 | Length: 789 |
| SNP | GGTCCGGCAATAAAGGTAAATTAATTATCCTTAAAAAGAAACACAAATCTTATACTATAATCAATTGAGACACTAGACATAAGAAG
AGATAGAGATCTGGTCATTTGGAAGATTAGCAAAAAATGGCATCATCGGAGCAAAAGTTGGTAGAAGAAAACGGGTCGGTGATTTC
AAGCTTGTTGGATAAAGCCAAAGGTTTCATTGCGGAGAAGCTAGCCAATATTCCAACGCCGGAAGCCACCGTTGACGACGTTGATT
TCAAAGGCGTGTCACGTCAAGGTGTTGATTATCACGCCAAGGTCTCCGTCAAGAATCCTTACTCTCAATCCATCCCTATTTGCCAG
ATCTCTTACATCCTCAAGAGTGCCACAAGGACGATCGCATCGGGCACGATACCGGACCCGGGTTCGTTGGTTGGGAAGGGCACCAC
GGTTCTGGACGTACCGGTTAAGGTGGCTTATGGCATAGCGGTTAGTCTAATGAAGGACATCGGCTCGGACTGGGACATTGACTATC
AACTTGACATTGGTCTAACCATCGACATTCCAGTTGTTGGTGACATTACCATTCCTGTGTCTACTCAGGGTGAGATCAAGCTCCCT
TCCCTTCGCGACTTCTTTTAATTTCAACTGTGTTCTTCTTAATTATAATCTAATTTTCAATAAAACATAGACGATCACATGAATGT
TTCAGTTCTGGATTTCTCTTTTGTTGGTTTTGTTATTGGGTTGTTTAAGTACTTTTATTGGTTATTTATGTTTCCGTGGTATGTGA
TTTACATTTTTAATT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_182137 Late embryogenesis abundant protein [Arabidopsis thaliana] | 768 | 1e-079 |
| XP_002880219 hypothetical protein ARALYDRAFT_483759 [Arabidopsis lyrata subsp. lyrata] | 768 | 1e-079 |
| 1YYC Chain A, Solution Structure Of A Putative Late Embryogenesis Abundant (Lea) Protein At2g46140.1 | 765 | 3e-079 |
| AAM63814 putative desiccation related protein [Arabidopsis thaliana] | 763 | 5e-079 |
| XP_002277223 PREDICTED: hypothetical protein [Vitis vinifera] | 538 | 7e-053 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O82355 Desiccation-related protein At2g46140 | 768 | 7e-081 |
| P46519 Desiccation protectant protein Lea14 homolog | 534 | 9e-054 |
| P46518 Late embryogenesis abundant protein Lea14-A | 531 | 2e-053 |
| O03983 Probable desiccation-related protein LEA14 | 497 | 2e-049 |
| P22241 Desiccation-related protein PCC27-45 | 445 | 2e-043 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A5AFM5 Putative uncharacterized protein | 538 | 5e-053 |
| C6TI71 Putative uncharacterized protein | 538 | 5e-053 |
| B9I8Q6 Predicted protein | 537 | 6e-053 |
| C6T1L4 Putative uncharacterized protein | 534 | 1e-052 |
| C6T430 Putative uncharacterized protein | 531 | 3e-052 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G46140.1 late embryogenesis abundant protein, putative / LEA protein, putative | 769 | 5e-082 |
| AT1G01470.1 LEA14 (LATE EMBRYOGENESIS ABUNDANT 14) | 498 | 1e-050 |
| AT2G44060.1 late embryogenesis abundant family protein / LEA family protein | 214 | 1e-017 |
| AT2G44060.2 late embryogenesis abundant family protein / LEA family protein | 214 | 1e-017 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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