Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN16174

FASTA Sequence
Unigene ID: UN16174Length: 1028 SSR 
GGACACATTTGCGTTTCGCAACCGCAAGAACCAAACTGATAAGATAACAAAACCTGTGGGCAGAATCTCTTTTTTTTTTTGGTAAA
GCTTTTGCATAATGGGAATGGTATTTGGTAAAATCTCCGTGGAGACACCCAAATACACCGTGGTCAAATCCGGCGACAGTTACGAG
ATCCGTGAGTATCCACCGACCGTTGCGGCCGAGATCACTTACGATCCTTCCGAGTTCAAAGACAACAGAGACGGCGGCTTCACGGT
CTTGGCCAAGTACATAGGCGTGTTCGGCAAGCCTGAGAACCAGAAGCCGGAGAAGATCGCCATGACTGCTCCTGTGATCACCAAGG
AAGGAGAGAAGATCGCCATGACTGCTCCGGTCGTGACCAAGGAAGGAGGAGGAGGAGGAGGAGAGGAGAAGAAGACGGTGACGATG
CAGTTTCTGTTGCCGGAGATGTACAAGAAGGCTGAGGATGCGCCGCGTCCGACTGATGAGAGGGTGGTGATTAGGGAGGAAGGAGG
GAGGAAGTACGGCGTGGTTACGTTCAGTGGTAACGCGGCGGAGAGTGTGGTGAGCGAGAAGGTGAAGAAGCTGAGGAGTGATCTCG
AGAGAGATGGGTTTAAGATCACCGGTGAGTTCGTCCTTGCTAGGTACAATCCTCCATGGACAATACCTCCGTTCAAGACCAACGAA
GTCATGATTCCTGTTGAATGATGAAAACTATATCCAAAGTTTATAGCTTTTGGTCTCAAAAAACTTGTCTTTTCAGAACAATAATG
TAATACAATGCCGGGTTTTGAATTTTAATAAATCAACGACAAAGAAGAGAAGTGTGTTTACTGTTTAGGTTGTGAATTATTAGAAT
TTACTATAGTTTGGCTTGTTTTAACCGGAGAAGAGCTTAAAAACGATGACAATCAAGTTAAAGAGCATGAGAGGGAGCCTCATGTA
GTGGCAGGCGTGGATGAGACCAACGATCTGGCCTTTGAGGGAGTTTCTTTTGCCGGTTTGGTGAAGCTCGGTGAGTGTCCAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAN82905 hypothetical protein VITISV_007253 [Vitis vinifera]7664e-079
XP_002527880 protein with unknown function [Ricinus communis]7647e-079
XP_002273576 PREDICTED: hypothetical protein [Vitis vinifera]7639e-079
ACU19835 unknown [Glycine max]7611e-078
XP_002322949 predicted protein [Populus trichocarpa]7352e-075

Swiss-Prot top hits (Blast detail)Scoree value
Q9SR77 Heme-binding-like protein At3g10130, chloroplastic2402e-019

TrEMBL top hits (Blast detail)Scoree value
A5B6E7 Putative uncharacterized protein7663e-079
B9SPG1 Putative uncharacterized protein7645e-079
C6TDD3 Putative uncharacterized protein7611e-078
B9IG30 Predicted protein7351e-075
C6SWB9 Putative uncharacterized protein6695e-068

Arabidopsis top hits (Blast detail)Scoree value
AT2G37970.1 SOUL-1; binding5725e-059
AT2G37975.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Yos1-like (InterPro:IPR013880); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54085.2); Has 146 Blast hits to 146 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 89; Fungi - 25; Plants - 26; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).2482e-021
AT3G10130.1 SOUL heme-binding family protein2401e-020
AT3G54085.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Yos1-like (InterPro:IPR013880); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37975.1); Has 139 Blast hits to 139 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 86; Fungi - 16; Plants - 26; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).1934e-015
AT3G54085.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Yos1-like (InterPro:IPR013880); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37975.1).1934e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  38%
 
104  50%
 
111  13%

Unigene MembersMember information