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Information for unigene UN16177
| FASTA Sequence |
| Unigene ID: UN16177 | Length: 2055 |
| SNP | GGGGCTTTCATTCTACCTCGGTGGACTTTATTATGGGAAGAACAAACTCCAAGTTAACAATGTTGCAAAAGCTGGATCTTCCTTGG
ACGTTGACAACTCTCCTCAAGTCAAATCCGTTTCTTTCTCGGAGTGTAGCAGTGACTACCAAGATTACACTCCCTGCACAGATCCA
AGGAAATGGAAGAAGTATGGTACTCACAGGCTTACCTTCATGGAACGCCATTGTCCTCCTGTGTTTGATAGAAAGCAGTGTCTTGT
TCCTCCTCCTAATGGGTATAAGCCACCGATAAGATGGCCTAAGAGCAATAACGAATGTTGGTACAGGAATGTGCCATATGATTGGA
TTAACAAGCAGAAATCTAACCAGCATTGGCTAAAGAAAGAGGGTGAGAAGTTTATTTTCCCTGGTGGAGGTACAATGTTTCCAAAT
GGAGTTAGCGCTTACGTCGATTTGATGCAAGATTTGATCCCTGAAATGAAAGATGGGACTATAAGAACTGCCATTGACACTGGTTG
TGGGGTTGCAAGCTGGGGAGGAGACCTTTTGGACCGTGGTATCCTCACAGTGTCACTAGCACCAAGAGACAACCATGAAGCCCAAG
TCCAGTTTGCTCTAGAACGTGGAATTCCTGCGATTCTCGGCATCATTTCAACTCAACGTCTCCCTTTCCCTTCAAACTCATTCGAT
ATGGCTCATTGCTCAAGATGCCTTATTCCATGGACTGAGTTTGGTGGGGTCTATCTTCTGGAGATTCACCGTATTCTAAGACCTGG
TGGCTTCTGGGTCTTATCTGGTCCACCAGTCAACTACGAGAACCGTTGGAAAGGTTGGGACACGACCGTTGAAGAGCAGAGATCAA
ACTACGAGAAGCTGCAGGATCTGTTATCATCAATGTGCTTCAAATTGTACGCCAAGAAAGACGATATCGCGGTGTGGCAAAAATCT
CCAGACAACATGTGTTACAACAAATTGTCTAACGACCCTGATGCATACCCGCCAAAATGTGATGATAGCCTTGAGCCAGACTCTGC
TTGGTACACGCCGTTACGCCCTTGCGTTGTGGTTCCAAGCCCTAAGCTTAAGAAGACAGATTTGGAATCTACTCCCAAGTGGCCGG
AGAGGTTGCACTCAACTCCTGAAAGGATCTCTGATGTTCCTGGAGGAAATGGTGGCTTGTTTAAGCGAGACGATAGCAAATGGAAA
ACGAGGGCTAAGCATTACAAGAAGCTGTTACCAGCTGTTGGCTCTGATAAGATCCGGAATGTGATGGATATGAACACTGCTTATGG
TGGTTTAGCTGCTGCTCTGGTCGATGATCCTCTGTGGGTCATGAACGTTGTCTCTTCTTACGCTGCAAATACACTTCCCGTTGTGT
TTGATCGTGGATTGATTGGAACTTACCACGACTGGTGTGAAGCTTTCTCGACATATCCGAGAACTTACGATCTTCTTCACGTCGAT
GGTCTGTTTACATCTGAAAACCAAAGGTGTGAGATGAAATATGTAATGCTGGAAATGGATCGGATCTTGCGTCCAAACGGGTATGC
GATCATACGAGAATCAAGCTACTTCGCGGACACCATTGCATCAGTCGCTAAAGAACTGAGATGGAGTTGCCGTAAGGAGAAAACAG
AGTCTGAATCAGAGAGTGAGAAGCTCTTGATTTGCCAGAAGAAGCTTTGGTATTCATCTAACGCAACTTCAGAAACAAAATAGAAA
AATGGACATACAAAGCTTAAGCTAAAAGCTTTTGTTTTGTCTGGAGGCTTCTTGAGAACAAAGTCACAACAACAATCATAGGTTCT
TTGTCTTTGCTTCAAATCTAAGAAAGGTGTTTAAAGCATTTTATTATCCCAGCATATTTTACCAACTTTCGATTCTTTCTTATAGT
ATATGCTTGGTGAGAAATACATTACCGATTTTTTATTTAAATTGTAATTTTATTTTGAATGGTTAAGTTCGAGATTTCTCCAATGT
TAGGTATATTGATTTGAGATCTAGTTATTGTTTTGTACGCTAAGACGTTGGTGGTCCATTATAAACATTTATCTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002867953 early-responsive to dehydration 3 [Arabidopsis lyrata subsp. lyrata] | 2984 | 0.0 |
| NP_567575 putative methyltransferase PMT21 [Arabidopsis thaliana] | 2954 | 0.0 |
| XP_002326766 predicted protein [Populus trichocarpa] | 2631 | 5e-295 |
| XP_002304375 predicted protein [Populus trichocarpa] | 2594 | 1e-290 |
| XP_002265127 PREDICTED: hypothetical protein [Vitis vinifera] | 2573 | 3e-288 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q94II3 Probable methyltransferase PMT21 | 2954 | 0.0 |
| Q9C6S7 Probable methyltransferase PMT20 | 2466 | 3e-277 |
| Q9C884 Probable methyltransferase PMT18 | 1334 | 6e-146 |
| Q9SZX8 Probable methyltransferase PMT17 | 1328 | 3e-145 |
| O80844 Probable methyltransferase PMT16 | 1307 | 8e-143 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PF07 Predicted protein | 2631 | 4e-295 |
| B9GZW0 Predicted protein | 2594 | 7e-291 |
| B8A0D9 Putative uncharacterized protein | 2257 | 9e-252 |
| C0P6M5 Putative uncharacterized protein | 2252 | 3e-251 |
| B6UBQ9 Ankyrin protein kinase-like | 2250 | 6e-251 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G19120.1 ERD3 (early-responsive to dehydration 3) | 2955 | 0.0 |
| AT4G19120.2 ERD3 (early-responsive to dehydration 3) | 2955 | 0.0 |
| AT1G31850.1 dehydration-responsive protein, putative | 2466 | 3e-278 |
| AT1G31850.3 dehydration-responsive protein, putative | 2466 | 3e-278 |
| AT1G31850.2 dehydration-responsive protein, putative | 2466 | 3e-278 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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