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Information for unigene UN16179
| FASTA Sequence |
| Unigene ID: UN16179 | Length: 688 |
| SNP | GGATTTCTACTGGTTCGGCGGCTCCCTAGGGTTTTTACTTGTAGCAGGAAAAAAATGCCGGCAGGACATGGAGTTCGTGCTAGAAC
AAGAGATCTGTTCGCGAGGGGGTTCAGGAAGAAGGGTACAATTCCATTGTCTACCTACCTCAGGACCTTCAAAGTCGGCGACTACG
TCGATGTTAAAGTGAACGGTGCGATCCACAAGGGTATGCCTCACAAGTTCTACCATGGTCGTACCGGTCGTGTCTGGAACGTCACC
AAACGTGCTGTCGGTGTCGAAGTCAATAAACAGATTGGCAACAGGATCATTAAGGAAGAGGCTTCATGTGCGTGTGGAGCACGTGC
AGCAGTCTAGATGCGCAGAGGAGTTCAAGCTGAGGAAGAAGAAGAACGATGAGCTCAAGGCTGCGGCCAAAGCCAAAGGTGAGACA
ATAAGCACCAAGAGGCAGCCTAAAGGCCCCAAACCAGGATTCATGGTTGAGGGTATGACCTTGGAGACTGTCACTCCTATCCCTTA
CGATGTCGTCAACGATCTCAAGGGAGGCTATTAGTTTTCTACTTACCTTCCCCCAGTGTTTTGTGTGTTTCTATCTTTCCTTCATA
TGTTTTGTAGCAACTTAAGACTTTCGTCTTCAATCAAGAACATGATTTTATTATATAGCAGAAGTTTTGTTATTGACAAAAAAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889760 60S ribosomal protein L21 [Arabidopsis lyrata subsp. lyrata] | 441 | 9e-042 |
| NP_563847 60S ribosomal protein L21-1 [Arabidopsis thaliana] | 440 | 1e-041 |
| NP_564724 60S ribosomal protein L21-2 [Arabidopsis thaliana] | 440 | 1e-041 |
| XP_002886727 60S ribosomal protein L21 [Arabidopsis lyrata subsp. lyrata] | 440 | 1e-041 |
| XP_002892517 60S ribosomal protein L21 [Arabidopsis lyrata subsp. lyrata] | 440 | 1e-041 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q43291 60S ribosomal protein L21-1 | 440 | 6e-043 |
| Q9FDZ9 60S ribosomal protein L21-2 | 440 | 6e-043 |
| Q54X53 60S ribosomal protein L21 | 327 | 7e-030 |
| O82574 60S ribosomal protein L21 | 315 | 2e-028 |
| Q9UUC1 60S ribosomal protein L21-A | 300 | 1e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WSS0 Putative uncharacterized protein At1g57860 | 440 | 8e-042 |
| B9SYV4 60S ribosomal protein L21, putative | 432 | 7e-041 |
| A2XCC4 Putative uncharacterized protein | 427 | 3e-040 |
| Q10RZ3 60S ribosomal protein L21, putative, expressed | 427 | 3e-040 |
| A5C0T5 Putative uncharacterized protein | 424 | 6e-040 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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