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Information for unigene UN16190
| FASTA Sequence |
| Unigene ID: UN16190 | Length: 1025 |
| SNP | GCAATCTGTAAGCTTGAAATATGTGAACAAGCAAGTTTGAAATTAAAGAGGTTCCAAACGTTTATGATAAATGTTTTGAGTTATAC
AAACTAGAAACAGAGAAATAAACAGAGATGAAACTACTTAAACATATTGGCAAGCTCGCCATTCTCGTACATTGAGGTCAATATAT
CACAACCTCCTAACAGTTCTCCTTTCACAAACACCTGCGGGAACGTTGGCCAATTACTATAACTCTTCAGCTTCTCTCTTAGCCCA
TGGTTATAGTCATCGTCAAGAACATCAACCGTTTCATAATCCACTCCTTGGCTCTCAAGAATCCCAACAACTCTCTGTGAGAATCC
ACATTGAGGAGCGCTTCTCGACCCTTTTATGAAAGCTACCACCTTGTTCTCTTTCACTAACCGGTCAATCAGTTCCTCTAAGGGGA
CATTGAGCTCGACATGGCGACCTGGAGTGAGACGGATGTCAGATTTCTTCCTTGGAGTCTGTTTGACCCATGTGTTGTTCCCTGAC
TTGTTCCCTGGAGGGACATTTCCCGTTACTTTTATGTGCTCTTCTATCCATGATTTCCATGCTTGTGTTAGAACAGCTTTGTCTGG
TTCTTCTACTATACCAACCTTGACGGAGCCACAAAGCTCCGGAACCGATTTCACGTGAGCAGCTACACTCGCCCCGATGTTCCGAG
ATATTCCGACGAACTGAAGCTCGTCGCTCTTATCGTAGACGGCGTACACGCCGGACTCCGCCGGAATCGATTCAGCCTCCGCGATC
GGGAGCTGCTCCGTCTCCCCCAGTGACTTTAAGGCGGAGGCGATTAGGAAGGGACGGCGAGATCGGGGTGTGTCGACGCGGAGGGT
GGAGGAGAGAGAGGGGAAGGAGAAGGATGGTGTGAAGCGTGAATAGAGAGTAAGGGTAGGGGTATTTCTGGAAATATGTGGACGGG
AAACACGGGGAGAGGGTGAGGCGTGCACAGAGGAGAAACTGATTGCAGCCATTTTTGTCGCAGGAGAGATTCGAGTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_565885 monothiol glutaredoxin-S16 [Arabidopsis thaliana] | 1300 | 5e-141 |
| AAN60257 unknown [Arabidopsis thaliana] | 1293 | 3e-140 |
| AAM64346 unknown [Arabidopsis thaliana] | 1291 | 5e-140 |
| XP_002881574 cax-interacting protein 2 [Arabidopsis lyrata subsp. lyrata] | 1236 | 1e-133 |
| XP_002263823 PREDICTED: hypothetical protein [Vitis vinifera] | 1007 | 4e-107 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8H7F6 Monothiol glutaredoxin-S16, chloroplastic | 1300 | 2e-142 |
| Q2QX01 Monothiol glutaredoxin-S12, chloroplastic | 816 | 3e-086 |
| Q4UK94 Probable monothiol glutaredoxin-2 | 276 | 1e-023 |
| Q68W05 Probable monothiol glutaredoxin-2 | 273 | 2e-023 |
| Q0IWL9 Monothiol glutaredoxin-S11 | 273 | 2e-023 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9T1J0 Glutaredoxin, grx, putative | 1000 | 2e-106 |
| B9IGC0 Glutaredoxin S16 | 897 | 2e-094 |
| A2ZIK9 Putative uncharacterized protein | 816 | 4e-085 |
| A3CFF5 Putative uncharacterized protein | 816 | 4e-085 |
| C5Y2Y5 Putative uncharacterized protein Sb05g000420 | 794 | 1e-082 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G38270.1 CXIP2 (CAX-INTERACTING PROTEIN 2); electron carrier/ protein disulfide oxidoreductase | 1301 | 1e-143 |
| AT3G54900.1 CXIP1 (CAX INTERACTING PROTEIN 1); antiporter/ glutathione disulfide oxidoreductase | 252 | 6e-022 |
| AT4G04950.1 thioredoxin family protein | 248 | 2e-021 |
| AT3G15660.1 GRX4 (GLUTAREDOXIN 4); metal ion binding | 230 | 2e-019 |
| AT3G15660.2 GRX4 (GLUTAREDOXIN 4); metal ion binding | 230 | 2e-019 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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