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Information for unigene UN16191

FASTA Sequence
Unigene ID: UN16191Length: 1019  SNP
GGATAAATTAATCTACTTCCTTCTCAAAGTATAAATTAGTTTAGCAATAATGAAGAGATAAATATTACAGATATAAAAAGAGATAA
ATTTTGACCAAAAAAATACAAAAAATAAAAAGAGATAAATCTACAATAGACGTGTATTCACACGATCCTCCTAATTAATCTCAACT
TCCCATCATCACACGATTCTTTTTCACCGTTTCATCTTTCTCCTCCTCTTCTCTATATCATTTCATCTTTTCCTTTTCTCTTCTCT
TTCTCCTGCATCGCAATCAAAAACTCTCTGTTCTAGAATTTATATCGAAGATGCCACTGGAGTATACTCCTATATCTCAGCTCAAT
GCGTCTAAGAAGGAATGGAAAATCAGAGTGCTGATCTCGCGGATTTGGGATTACTTTGCCAAATATAAACCTGATGTTGTTCTTGG
AATGGAAGCGATCCTTGTGGATGAAAAGGATTCAAGCTTCTCTGAAACCGAAACTGATTAAAAAATACAAAAGGGAGCTACAAGAA
GGAGAGTATCTAGATGTGATGAATTTTGAAGTAGTGGATAACAATGGTGATTACAGAGGAACCACACATCCTTTCAAGATTAATTT
TATATATACTACATATGCGAAGAAGCCCTCTTAGATGATTCCAAATCTCTCCCGCTTCAACTTAAGCCCCTTTCCAGATATTTTAT
CTCTGTCAAATGTTGATGATGCCTTCATAGACATACTTGGTGAAATTGTTGGCATGGGTCAGATTACCGACAGAAACTATGCTGGA
ATTTAACAAACTGTTGGACATTCAACTACGTGATCTGAGTGAAACAATCATTGATGTACTCTATGGAAAAAACATGCTGAGGATGT
GCACTCTTACGTGAAGAACAACAAAACAGGTCCTGTTATCTTGCTTGGAAGTCTCATGAGGACCAAAAAATTCAATGATACGTAAT
CATTTTCTAAGTTTATGTATTAACGTAACAAAGTACATTTTTTTTAATAACAGATTTAACAATAGTTTAACAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874648 hypothetical protein ARALYDRAFT_352148 [Arabidopsis lyrata subsp. lyrata]3122e-026
XP_002867275 hypothetical protein ARALYDRAFT_913278 [Arabidopsis lyrata subsp. lyrata]2592e-020
NP_680253 uncharacterized protein [Arabidopsis thaliana]1912e-012
ABD28510 Nucleic acid-binding, OB-fold, subgroup [Medicago truncatula]1599e-009
NP_850486 Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana]1581e-008

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q3E8V5 Putative uncharacterized protein At5g28885.11911e-012
Q2HVD7 Nucleic acid-binding, OB-fold, subgroup1596e-009
Q2HSY3 Nucleic acid-binding, OB-fold, subgroup1552e-008

Arabidopsis top hits (Blast detail)Scoree value
AT5G28885.1 unknown protein1917e-015
AT2G05642.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Protein of unknown function DUF223, Arabidopsis thaliana (InterPro:IPR003871); BEST Arabidopsis thaliana protein match is: replication protein-related (TAIR:AT1G52950.1); Has 317 Blast hits to 292 proteins in 67 species: Archae - 0; Bacteria - 13; Metazoa - 20; Fungi - 36; Plants - 193; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).1585e-011
AT1G52950.1 replication protein-related1262e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  38%
 
123  38%
 
82  25%

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