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Information for unigene UN16193
| FASTA Sequence |
| Unigene ID: UN16193 | Length: 1416 |
| SNP | GGATCGTGGAACACCCATATTCTCTCGTTTCTCTCTATTTCTTCTTCGTTCCTCGATCTTCTCCGTCGCCGATCTCGCCACTTCAT
TTCCCGCGAGTTGATTTGGTACAAAGCGTTGAGAACAAAAAATGGTAGGAGGAGGAGTTATCCAGCAGATTCTCAGGAGGAAGCTT
CACTCCCAATCCCTCGCAACTCCGGTCCGGTCGTGGTTTTCTTCGAAGACTGCTCATGTGGATGCTGGGTCTTCTGGTGTGAGAGC
ATTTGCGCTCTTGGGTGCTGGTGTTACTGGGCTGTTGAGTTTTTCTACAGTAGCATCTGCTGATGAGGCCGAACACGGGTTGGCTT
GTCCAGACTACCCTTGGCCTCATGATGGCATTCTCAGCTCATATGACCATGCCTCGATCCGTCGTGGGCATCAAGTTTATCAGCAG
GTGTGTGCATCTTGCCACTCGATGTCTCTCATCTCATACCGAGATTTGGTGGGTGTCGCCTACACAGAGGAAGAGGCAAAGGCAAT
GGCAGCTGAAATCGAGGTGGTTGATGGACCTAATGATGAGGGTGAGATGTTCACCCGTCCTGGTAAACTCAGTGACCGCTTGCCTC
AACCTTATGCCAATGAATCAGCGGCAAGGTTTGCTAATGGTGGAGCGTATCCTCCTGATCTCAGTCTTATCACTAAGGCACGTCAC
AACGGTCAAAACTACGTCTTTGCTCTCCTGACGGGTTACCGTGATCCTCCTGCTGGCATTTCAATTAGAGAGGGGTTACACTACAA
TCCTTACTTCCCAGGGGGAGCAATTGCTATGCCGAAAATGCTCAATGATGAAGCTGTTGAGTATGAAGATGGTGTCCCCGCCACAG
AGGCACAGATGGGTAAAGATGTTGTGTCATTCTTGTCTTGGGCAGCTGAACCAGAAATGGAAGAGAGGAAGTTGATGGGTTTCAAA
TGGATATTCCTACTATCTCTCGCTCTCCTCCAAGCAGCGTACTACAGGCGACTGAAATGGTCGGTTCTCAAGTCTCGCAAGCTGGT
TCTTGACGTGGTGAACTAAAATCACTGCGTAGTAAGCTTTTGCAGTTGGCTACTACACTGTCCTCTTTTCAGCAAAAATCTCCATT
TTATGTCATAAAAATCTTTGATGGGACCATCCGTTCTCGCCGGAAGGTGGAAAATCTCATCTTTTCTTAATTTTTTTTACTTCTGA
GTATCTCTAGGGAGTTTTATGAGGATAATAACGACAAAAAATATTTCTGCCTCATAATCAAACATGATTTTGTGGTTTATACATTT
TGTTTCTTGTCCATGCCGATACGGTTCAGCTTTCGGGTTTGTTTCAATAAAGAATATCTTTGTACTTGGTTTCCTGGTTTGCTTTC
GGTGTTCTTCCTTTTTGAGTTTGTTACTCTCTTTTTCGCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_189360 ubiquinol-cytochrome c reductase cytochrome c1 subunit [Arabidopsis thaliana] | 1543 | 5e-169 |
| XP_002877032 AT3g27240/K17E12_6 [Arabidopsis lyrata subsp. lyrata] | 1541 | 8e-169 |
| AAM65645 cytochrome c, putative [Arabidopsis thaliana] | 1539 | 1e-168 |
| AAL51110 AT3g27240/K17E12_6 [Arabidopsis thaliana] | 1538 | 2e-168 |
| NP_198897 ubiquinol-cytochrome c reductase cytochrome c1 subunit [Arabidopsis thaliana] | 1526 | 5e-167 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P25076 Cytochrome c1-1, heme protein, mitochondrial | 1327 | 2e-145 |
| P29610 Cytochrome c1-2, heme protein, mitochondrial (Fragment) | 1289 | 6e-141 |
| Q9D0M3 Cytochrome c1, heme protein, mitochondrial | 814 | 7e-086 |
| P00125 Cytochrome c1, heme protein, mitochondrial | 805 | 8e-085 |
| P08574 Cytochrome c1, heme protein, mitochondrial | 799 | 4e-084 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LK29 Ubiquinol-cytochrome c1 reductase cytochrome c1-like protein | 1543 | 3e-169 |
| Q8LA08 Cytochrome c, putative | 1539 | 1e-168 |
| Q940N2 AT3g27240/K17E12_6 | 1538 | 1e-168 |
| Q9FKS5 Cytochrome c1 | 1526 | 3e-167 |
| Q0WNJ4 Cytochrome c1 | 1521 | 1e-166 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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