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Information for unigene UN16201
| FASTA Sequence |
| Unigene ID: UN16201 | Length: 806 |
SSR | | CAAGACTATTTTACATAAAATCAAAGGCTCAAGATAAGTTTCAAGCATACAATAGAATCCAGAATCAATTATTGTCTCAAGTAGAT
ACCAGACACAGGACTCTCTCATCAAACTCCATGTTCTCACACACACACACCTCTTCTTTTATTAGACGACATTTAATACATTCAAA
CACAAACAGAAGACAGTTCAGATTAACACACACCATTCATCTTCTTCCTCTCCTTCACAAACTTCCTCCATCCAACAATGACTTCC
ATCAGAATGTCCCTTTCCACCTTCTTCCCTTTCACATTTCCGAAATCCTCTGCTCCCATCTTCTTGGATATCTTGGATGGCAAGGT
GTCGAGCTCGTGAAGCACCTTCACAATATCAGCCACAAGTCTCTCCGCAAGTGTTCTTGAGAAATCTTCCCTTATGACAACACGGA
GAACCGTGATGTGTTGCGCATCCGCAGGCATGGTGTAAGCCGGTACAATCCAGCCGAAACGGCGTAGCATCTCCGAGATCTCGAAC
TCGTTGTGGAAACTGTGGTCCTTGAGAGAGAAGGCTACGAGTGGCACTCCTACCTCCTTTGAGACTATGTTGAAACGCTCTGTTTT
CTCTATCCCTTCTCTTAGAACCACCATGTTCTCTCTGCAGTTCTCCATCACGTTCTTGTAGCCCTCGAAGCCAAGACGAATGAGCT
GATAGTATTGAGCAATAATTTGGCTCGATCCCTTGGAGAAATTGAGAGTGAAAGTGGGTTGATCAGCACCAAGATAGTTGATATGA
AAGATGAGCTCATCAGCAAATCCTGTTGTGTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAS79669 glutamate decarboxylase 2 [Brassica juncea] | 1005 | 5e-107 |
| NP_001117556 glutamate decarboxylase 2 [Arabidopsis thaliana] | 925 | 9e-098 |
| AAL91148 glutamate decarboxylase, putative [Arabidopsis thaliana] | 925 | 9e-098 |
| NP_176771 glutamate decarboxylase 2 [Arabidopsis thaliana] | 925 | 9e-098 |
| AAL16126 At1g65960/F12P19_12 [Arabidopsis thaliana] | 921 | 3e-097 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q42472 Glutamate decarboxylase 2 | 925 | 4e-099 |
| Q07346 Glutamate decarboxylase | 769 | 5e-081 |
| Q42521 Glutamate decarboxylase 1 | 693 | 3e-072 |
| P54767 Glutamate decarboxylase | 632 | 4e-065 |
| Q928K4 Probable glutamate decarboxylase gamma | 294 | 6e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6Q4I3 Glutamate decarboxylase 2 | 1005 | 3e-107 |
| Q56W28 Putative uncharacterized protein At1g65960 | 925 | 6e-098 |
| Q8RXH0 Glutamate decarboxylase, putative | 925 | 6e-098 |
| Q944L6 At1g65960/F12P19_12 | 921 | 2e-097 |
| Q8LKR4 Glutamate decarboxylase | 786 | 8e-082 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G65960.1 GAD2 (GLUTAMATE DECARBOXYLASE 2); calmodulin binding / glutamate decarboxylase | 926 | 3e-100 |
| AT1G65960.2 GAD2 (GLUTAMATE DECARBOXYLASE 2); calmodulin binding / glutamate decarboxylase | 926 | 3e-100 |
| AT2G02000.1 GAD3 (glutamate decarboxylase 3); calmodulin binding | 773 | 2e-082 |
| AT2G02010.1 GAD4 (glutamate decarboxylase 4); calmodulin binding | 741 | 8e-079 |
| AT5G17330.1 GAD; calmodulin binding / glutamate decarboxylase | 693 | 3e-073 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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