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Information for unigene UN16202
| FASTA Sequence |
| Unigene ID: UN16202 | Length: 807 |
SSR | | GCTAAATTTTTGACTCATATTTGAGAAATAAAGAAACACACTGTATTGCATAAGCATCAAAATTATTCAGATATGAGAATCAAAAC
AACAGTAGAAAACACAGGAAACTCAAAAAAATCAGAACACAAAAGGCCATCCTTAAAGCTCTTTTCTCCATCCTCAGATTTTGTTG
AAGGCAACAATGTCACAGCTCTGGACAAACTCATTGATTGGCTCGACGGTGAGCGTCTCTTCAATCATGGTGTCAACAGAGACGAG
GTCGTCAACAATGGTGCACATGATCTGCAACTTCTTGATACCGTAACCAACCGGTACAAGCTTTGACGCTCCCCAGAATAAACCTT
CCATCTGGACGGATCTCACAGCTTCCTCTAGCTTCTTCATGTCAGTCTCATCATCCCATGGCTTGATATCAATCAAGACTGATGAC
TTTCCAGATTCCTTCTTCTTAGTAGATGCCTTCACGGAAGCAGCTCTCTCTTCAGCAGCTTTCTTCTCCTCTTCGGTCTCCTCACC
GAAAAGGTCAACATCATCATCATCATCTTCCTCATCAGCCGCATCCTTAGAATCAGCTGCTGGTGGAGTAGCAACAGCCTCCTCTG
CGACTGGGACTGATCCCTCAACAATGACACCGCTTCCTTCAGCAGAGACACCAGAGATCCTCAAGAGGGCATCGATGTGGCTGTAC
CAACGAGATGCGTTGACATACTGTGAAGTTGGGGGCTTAGCAAGAGCTGTAAAGACAGTGATGTCATCCTTTGAAGCCTGGTACCC
AGTGATGTAACTGCGAGTGAGGAGATGCTCGTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABK78691 putative elongation factor 1-beta [Brassica rapa] | 1042 | 3e-111 |
| XP_002890860 elongation factor 1-beta [Arabidopsis lyrata subsp. lyrata] | 1042 | 3e-111 |
| NP_174314 elongation factor 1-delta 1 [Arabidopsis thaliana] | 1036 | 1e-110 |
| E86426 probable elongation factor 1-beta [imported] - Arabidopsis thaliana | 1036 | 1e-110 |
| NP_001077627 elongation factor 1-delta 1 [Arabidopsis thaliana] | 1036 | 1e-110 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P48006 Elongation factor 1-delta 1 | 1036 | 6e-112 |
| Q9SI20 Elongation factor 1-delta 2 | 1018 | 7e-110 |
| P93447 Elongation factor 1-delta | 857 | 3e-091 |
| O81918 Elongation factor 1-delta | 844 | 1e-089 |
| Q40682 Elongation factor 1-delta 2 | 809 | 1e-085 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A0T2P4 Putative elongation factor 1-beta | 1042 | 2e-111 |
| A8MRC4 Uncharacterized protein At1g30230.2 | 1036 | 9e-111 |
| B3LF87 At1g30230 | 1036 | 9e-111 |
| B9RAH5 Elongation factor 1-beta, putative | 931 | 1e-098 |
| C0LJH8 Seed ripening regulated protein | 916 | 7e-097 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G30230.1 elongation factor 1-beta / EF-1-beta | 1037 | 4e-113 |
| AT1G30230.2 elongation factor 1-beta / EF-1-beta | 1036 | 5e-113 |
| AT2G18110.1 elongation factor 1-beta, putative / EF-1-beta, putative | 1019 | 5e-111 |
| AT5G12110.1 elongation factor 1B alpha-subunit 1 (eEF1Balpha1) | 617 | 2e-064 |
| AT5G19510.1 elongation factor 1B alpha-subunit 2 (eEF1Balpha2) | 543 | 8e-056 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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