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Information for unigene UN16212
| FASTA Sequence |
| Unigene ID: UN16212 | Length: 935 |
| SNP | ATAGCTGAACCCTGATGGAACAATTTAAATTTAATATTTAATTTGGTGGAGGCAAAGCTAATGCATACACAAGAAATTGCCATTTT
CTGGGGTTAAAAAAAAAAACTTGAAACACAAATTCGGATTCAGGGATTTGAGTTTAAGTACTCAGGAAACAAAAAAAAATCAAGAG
ACAATAAGATTTACAAAGAAAAATGCAGAGCATTGAAATGGTTTAACCAAGCTTGGCAAGAACATCGTTCAAACTAGAGACAGTCT
CTGCATAGTACTTCTCAGCATCCGGAGTACTCTTCTTCTTCGCCGCATAATCCAGATTGTTGATGGTATCAAAGAGCTTTCCAGTG
AGCGCCTTGAGAGACTTCTTCTCATCCTTTGATTTGGAGGAGATGATTGTGTTAAGGTCATAACGGAGGTAAGAAGCCCTGAGACG
GAGATCGTTCTGAACATATGGCCAAGCTTTCTTGTCGATCAATGACTTCACATTCACGATCTCCTTGGCAGATTCTTTGGCTCTAG
CCACAGCTTCCGTCGGTGGCAATGGCTGTAAATAAAACCTTTCCTTCAACGCCAGTTTCAGATCTCTCGCTTGGTCTGAGTTATCT
GTCCCAGGAAGACCACCGGAGGGAGGTGGAGGAGGGCCAATTTTGATAGGGACAGCATCGGCGAGTACAGCCTGAACAAACGAGCC
ACCGGCTAAACCAGCAGCCACGAGCCCAATCACAGACCTTCGAGTAGTCTCTGGTGCCGCCTCGCTCTGCTGAGCTCTGACGACAA
GTCCAGACCTTTGAGCCACCGTTACTTTTCCGGTTACGTTCAGACGGCTAGAGCCGTTGATCTTCACGCTTCCTTCGAGAACGGCG
GGAGATGTGACACGTAAGCCAACACCCATCGAAGCCATTTTTATTTTATTTTTGTTTCTTAGAGACGAAAGTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAF81515 oxygen-evolving enhancer protein 3-2 [Brassica rapa] | 1103 | 3e-118 |
| NP_193860 oxygen-evolving enhancer protein 3-1 [Arabidopsis thaliana] | 907 | 1e-095 |
| XP_002869896 PSBQ/PSBQ-1 [Arabidopsis lyrata subsp. lyrata] | 900 | 1e-094 |
| NP_001031687 oxygen-evolving enhancer protein 3-1 [Arabidopsis thaliana] | 895 | 4e-094 |
| XP_002874836 photosystem II subunit Q-2 [Arabidopsis lyrata subsp. lyrata] | 892 | 8e-094 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9XFT3 Oxygen-evolving enhancer protein 3-1, chloroplastic | 902 | 2e-096 |
| Q41932 Oxygen-evolving enhancer protein 3-2, chloroplastic | 867 | 3e-092 |
| P12301 Oxygen-evolving enhancer protein 3, chloroplastic | 730 | 2e-076 |
| P83646 Oxygen-evolving enhancer protein 3, chloroplastic | 650 | 4e-067 |
| Q0D5P8 Oxygen-evolving enhancer protein 3, chloroplastic | 650 | 4e-067 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8CF48 Oxygen-evolving enhancer protein 3-2 | 1103 | 2e-118 |
| A9PFR3 Putative uncharacterized protein | 826 | 3e-086 |
| A9PF82 Putative uncharacterized protein | 822 | 7e-086 |
| B9HYU5 Putative uncharacterized protein | 820 | 1e-085 |
| C6SXP3 Putative uncharacterized protein | 792 | 2e-082 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G21280.1 oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ1) (PSBQ) | 915 | 7e-099 |
| AT4G21280.2 oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ1) (PSBQ) | 903 | 2e-097 |
| AT4G05180.1 PSBQ-2; calcium ion binding | 868 | 2e-093 |
| AT2G01918.1 calcium ion binding | 132 | 4e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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