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Information for unigene UN16215
| FASTA Sequence |
| Unigene ID: UN16215 | Length: 743 |
| SNP | GGCAAAGCTTAGCTTAAGCTTAAAGAAGATAATATATATCTCAACTTAACGAGTGTTCTCGCATAGACATGACATGGTTAAAGAGT
TAACCATGAGCTGAGAGATGATGAATCCACGGCTGACATAACTATTTTCTGACTCGAGATGAACGAGAAAATAAATAATGGTAAAA
CTTGTCGGTACATAAGTCGAGTTACAGACAGATAGAATGGTATAAACATTAAACCAAGTAACACACAATTGTTTTTACAGCTCTCA
TTTTTTAAGCTTTGACTTCTTCAACCTCGTCCAATGCGTAGTTGTTGGTCGATATGTTGGCGTAGTTCACTTTCGCGAACCGGACC
ACAACAGGGTACCGAGTCTTCGGATCCTGATCAACGGCCACAACTGCTCCAACGTTCTTGAACCAGTAGGATTCTCTCCTTAGGAT
CTTGACCTTGGACCCTCTCTTAGGGCCGATCGGAGGCGGTTTTGGTTTGGTGGCAGCAGCTCCACCCGGAGCCACGGCAGTTGCTG
GTGCACCTTCTGAAGAAGATGTTTCCGCAGCGGCCTCGTCGGCTGCTCTGACTACAAGTCTAGAACCAGCCCTTCTCATCGGTAAG
AAAGACACTGAGTTCCTGGAAGACGAAGGGCCGGTGGCCGCCGTGACGTTAGCCGTCAAAACAAACGCCGAAGACGCTGACATCAT
CGACATCTCTGGGATTTTTTTCTCTTTTTTTTTTTTTTGCTTCGTATTGTTGTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002867438 hypothetical protein ARALYDRAFT_491882 [Arabidopsis lyrata subsp. lyrata] | 611 | 2e-061 |
| NP_567818 photosystem I reaction center subunit IV A [Arabidopsis thaliana] | 584 | 3e-058 |
| AAN41281 putative photosystem I subunit PSI-E protein [Arabidopsis thaliana] | 578 | 1e-057 |
| XP_002885991 hypothetical protein ARALYDRAFT_899838 [Arabidopsis lyrata subsp. lyrata] | 526 | 1e-051 |
| NP_179616 photosystem I reaction center subunit IV B [Arabidopsis thaliana] | 509 | 1e-049 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9S831 Photosystem I reaction center subunit IV A, chloroplastic | 584 | 1e-059 |
| Q9S714 Photosystem I reaction center subunit IV B, chloroplastic | 509 | 6e-051 |
| P13194 Photosystem I reaction center subunit IV, chloroplastic | 398 | 5e-038 |
| Q41228 Photosystem I reaction center subunit IV A, chloroplastic | 383 | 3e-036 |
| Q41229 Photosystem I reaction center subunit IV B, chloroplastic | 382 | 3e-036 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8H127 Putative photosystem I subunit PSI-E protein | 578 | 1e-057 |
| Q9FDY5 Putative photosystem I subunit PSI-E (Fragment) | 504 | 4e-049 |
| Q8LC58 Photosystem I reaction center subunit IV B, chloroplast (PSI-E B) | 503 | 5e-049 |
| Q7FY22 AT4g28750 | 479 | 3e-046 |
| B9S592 Photosystem I reaction center subunit IV A, chloroplast | 457 | 1e-043 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G28750.1 PSAE-1 (PSA E1 KNOCKOUT); catalytic | 585 | 9e-061 |
| AT2G20260.1 PSAE-2 (photosystem I subunit E-2); catalytic | 509 | 6e-052 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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