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Information for unigene UN16219

FASTA Sequence
Unigene ID: UN16219Length: 872 SSRSNP
GTTTTAAGGGAAAATGAAAATAATCATACCATAAAAATACCTTTGAAATCATAATATACAACACATAACAAGGAAAGCTGAAATCA
ACAAAGGAAATAATAAAAAAGCCAACAAACTTCCAACAACACAAAAGCAAAAGATGATCATCATTCAACACAATAACACATCATCA
TCATCATCATCATGATTCATATCTTTAATGATCATCCTTATCCTTCTTTTCCTCCTCTACAGTCTTGGGATGGTAGCCTGGAAGCT
TCTCCTTAATCTTCTCCAAGATCCCTTTCTTCTCCGCCGGATGCGCTTCCTCCACCGGAGGAGCAACAACCGGTGCTGGTGGAGCA
TCTTCAGGCTTCTTTCCGTGTCCAGGAAGCTTCTCCTTCAGCTTATCCATAAACCCTTTTTTCTCCTCCTCCTCTGTCTTCACCTC
TCCTTCACTAGTTACCTTCTTCTTGTCCTTCTTCTTCTTCCTCTTCACACCATCTTCGCCTTCTTCCTCGCTCGAGGAGCTTGAAG
AGCTGTCGCTGCGGTGAAGCTTCTCGAGGAGACTATGATGCTTCTTCTCTTCTTCTTCTTCCTCGTGTTTAACCTCAGGCGCCGGC
TCTGAGACGTGAACCTTTTGCTCAAACTCAGACGCTATGGCGGTCTCCTCTGGTTTTGTTTCATCTTTCTTCTTCCCCAAGAAATC
GAACAGTCCACGATCTGTAACCTCTGTGGCCCCTGCTGATGATTCCTCCGACTCTACCTTTGGCACCTCAACGTTCTTGGTTTCCT
CTGCCATAGTTATCGGGAAAAGTTTTGTTTGCTCTGCTGATGAGAATACGAAACGATCAAATGTATACTTGAGATGATTTGTAAGA
GACGAATGATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAA64428 pollen coat protein [Brassica oleracea]8408e-088
ABV89609 pollen coat protein [Brassica rapa]8301e-086
ABD95987 dehydrin [Brassica juncea]7539e-078
NP_177745 dehydrin ERD14 [Arabidopsis thaliana]6704e-068
AAG40050 At1g76180 [Arabidopsis thaliana]6704e-068

Swiss-Prot top hits (Blast detail)Scoree value
P42763 Dehydrin ERD146702e-069
P31168 Dehydrin COR474462e-043
Q9XJ56 Phosphoprotein ECPP444462e-043
P42759 Dehydrin ERD104273e-041
P46524 Dehydrin COR4102141e-016

TrEMBL top hits (Blast detail)Scoree value
Q39386 Pollen coat protein8405e-088
A8IXD7 Pollen coat protein8308e-087
A9X5B5 Dehydrin7537e-078
C6EQ93 Dehydrin protein5781e-057
D3YBC2 Dehydrin b4732e-045

Arabidopsis top hits (Blast detail)Scoree value
AT1G76180.1 ERD14 (EARLY RESPONSE TO DEHYDRATION 14); calcium ion binding6737e-071
AT1G20440.1 COR47 (COLD-REGULATED 47)4462e-044
AT1G20450.1 ERD10 (EARLY RESPONSIVE TO DEHYDRATION 10); actin binding4272e-042
AT1G20450.2 ERD10 (EARLY RESPONSIVE TO DEHYDRATION 10); actin binding3994e-039
AT1G56660.1 unknown protein1423e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
611  26%
 
105  12%
 
915  36%
 
1210  24%
 
31  2%

Unigene MembersMember information