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Information for unigene UN16235

FASTA Sequence
Unigene ID: UN16235Length: 1106 SSR 
GAGAGAGAGAGAGAGGAAGCAGAAGAAGATAGATAGATTCGATTCAGACCAGAGAATCGTAGATTGATCGAAGAAGATGAACACTG
ACATCACTGCCTTGGAGAAGCCCCAATACCCCGTCGTCGATCGGATCCACCATTCACAAAAGTCGTCTTCAAGCTGTGGATGGAGT
GGAGGATAGCGAGTCCGAGTCCGGGGAGGAGATTGATGAGGAGGAAGTTGGGGATGATGATGTGGTTGAGGTTCATGAGATTGAGG
ATAGTGATAATGAGGAAGATGGGGTTGATGATGAGGAGGATGAAGAGGAGGAGGAGGAGGATGAAGTGGATAATGTCGATCGTGGT
CTTGGTGGGTCAGGGAGTAGTACTGGACGGTTGATGAATGCGGTGGAGATTGATGGGCATGAGCAAGGGGATGATGATGAGGATAA
TGATGGTGAGACTGGTGAAGACGACCAAGGGGTTGAGGATGATGGTGAGTTTGGTGATGATGATGATGATGATGATGGTGATGAGG
AGGATGAAGAATCTGGTGAAGGGTATCTTGTTCAGCCAGTCTCTCAAGTGGAAGATCATGATGCTGTGGGTAGTGACATCGAACCC
ATTAACGAGGACAACGATCCAGATGAAGAAGAAGAAGTGGAAGATGATCTCCCAATGCCTGACCAGTCCTTGCCATCATCATTTCG
TCCAAAGAGAAAACGTGATGGTGATGAAGATGATGATGATGTTGATGATGATGATGATGATGATGATGACGATGATGGGGTTGATG
ATGAGGAAGATTAGTTGTGTACACACAAACCGTTGCTACTTGTGGAATAGGGCGGCAATGTTCAAAATAGTCAGTTATGGTGAGGC
TGGTGGATTTTCAAATGACGGTTACTCAAGTTGGATTTACCGCCCTTTTAGAAACCCCCAACGTTATGGAGGGAAAGAACCAAAAA
AACAAAACAAAGACAGGATATGATAGTGTTCTCGAGACCTTGTTTCTCTGTTAGAGGGTCTTGTAACATGCCTTTATGTAATAAAT
TTTTTGAAGTTATATCTCATCAGTCTTCTGTTTCACTACACTTACACATGTCGTATCGTTATTGGCCAGGATGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002877761 hypothetical protein ARALYDRAFT_485417 [Arabidopsis lyrata subsp. lyrata]8265e-086
NP_190638 acidic leucine-rich nuclear phosphoprotein 32-related protein [Arabidopsis thaliana]8061e-083
XP_002813170 PREDICTED: hypothetical protein LOC100442257 [Pongo abelii]3589e-032
CBZ53517 conserved hypothetical protein [Neospora caninum Liverpool]3543e-031
CBZ30607 proteophosphoglycan ppg1 [Leishmania mexicana MHOM/GT/2001/U1103]3302e-028

Swiss-Prot top hits (Blast detail)Scoree value
Q9SCQ7 Acidic leucine-rich nuclear phosphoprotein 32-related protein8064e-085
Q75JC9 Uncharacterized protein DDB_G02716703621e-033
Q17RH7 Putative protein TPRXL3047e-027
Q8MP30 Uncharacterized histidine-rich protein DDB_G02745572752e-023

TrEMBL top hits (Blast detail)Scoree value
A4HM86 Proteophosphoglycan ppg43254e-028

Arabidopsis top hits (Blast detail)Scoree value
AT3G50690.1 leucine-rich repeat family protein8082e-086
AT3G10810.1 zinc finger (C3HC4-type RING finger) family protein1542e-010
AT1G12830.1 unknown protein1513e-010
AT1G48400.1 F-box family protein1433e-009
AT5G63740.1 zinc finger protein-related1381e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  25%
 
92  25%
 
72  25%
 
122  25%

Unigene MembersMember information